Citrus x clementina (clementine): CICLE_v10016367mg
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Entry
CICLE_v10016367mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CICLE_v10016367mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10016367mg
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10016367mg
Messenger RNA biogenesis [BR:
cic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CICLE_v10016367mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
Pre-60S particles
RNases
CICLE_v10016367mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DUF4901
DUF7232
Motif
Other DBs
NCBI-GeneID:
18050905
NCBI-ProteinID:
XP_006446393
UniProt:
V4TH04
LinkDB
All DBs
Position
Unknown
AA seq
217 aa
AA seq
DB search
MCLRETVESKSKANSSSNLTLENQQNSQTHLEFEYKMPLVWIDLEMTGLNIEVDRILEIA
CIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQV
VEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDY
RKVPSKEQRHRALDDIRESIMELKYYKENIFKTNLRK
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttgcgcgagacagttgagagcaaaagcaaagcaaacagctctagcaatttgact
cttgaaaaccaacaaaattctcagactcacttggaatttgagtacaaaatgccccttgtg
tggattgacttggaaatgacaggtttgaatattgaagttgatcgaatactggagattgct
tgtataattactgatggcaagttgacaaaatcagtggagggacctgatttggttatccat
caaactaaagagtgtttagatagcatgggtgaatggtgtcaaaatcatcatgaagctagt
ggattgacagaaaaggtgcttcatagtgccctgactgaaagagaagctgaaaagcaggtt
gtagaatttgtcaagaaaaatgttggtacatacactcctcttcttgcagggaattcagta
tacgtggattttatgttcttaaagaaatacatgccagacttagctagtcttttctctcat
gtacttgtcgatgttagcagtatcaaggctttatgcatgcgctggtatcctagagattac
aggaaagttccttcaaaagaacagagacacagagccttggatgatatcagagaaagcatc
atggaactcaagtactacaaggagaatatatttaaaacaaatttgaggaagtga
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