Citrus x clementina (clementine): CICLE_v10017592mg
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Entry
CICLE_v10017592mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CICLE_v10017592mg
Enzymes [BR:
cic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CICLE_v10017592mg
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
PLipase_C_C
Motif
Other DBs
NCBI-GeneID:
18050761
NCBI-ProteinID:
XP_006449752
UniProt:
V4UAE9
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
VILDNGLVRLTISKPQGYLIGIQYGGMDNLLDLKSSESSRGYWDINWNLPQGQDRYQLLN
GSEYSVINMSNDSVEVSFRSSYDPSIQSTKLPLSVDIRYILRSGVSGFHCYSIYGRPPGC
RAFDLAQTRLAFKLRRDKFHYMAITDEKQRIMPLPEDLLPGRGKQLIVPESVLLVNPINP
DLKGEVDDKYQYSMDNKDGGLHGWIGSGPIIGFWIIFPSHEFRNGGPTKQNLTVHTGPTC
LAMFHGTHYIGNEILAHFQEGETWRKVFGPIFVYLNSTSDASKAYNLWIDAKKQRLLQEA
AWPYDFVSSPYYLTANERGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTESK
DYQFWVQTDSKGNFTVKNVVPGVYGLHGWVPGFIGDYLDKALVNISAGSQTELGNLTYVP
LRNGPTVWEIGFPDRTALGCYVPDVNPMYVNKLFLNSPEKYRQYGLWDRYTDIHPESDQV
FTVGVNDPKKDWFFAHVDRMGPDNKYLPTTWTIKFHLDSIIKGTYNLRLAIASATRSDLE
IFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGDNSMFLVQSRSG
DPVCGVLYDYLRLEAPTSSS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
gtgatacttgacaatggtttggtcaggcttacaatatcgaaacctcaggggtatttaatt
gggatacagtatggaggaatggacaaccttttagatctcaaatcaagtgaatccagtaga
ggatattgggatatcaactggaatttgccacagggccaggacagataccaactactcaat
ggatctgaatatagtgtaatcaatatgagcaacgacagtgtagaggtttcattcaggagt
tcttatgatccatcaattcaaagcaccaaattgcctctcagtgttgacatcaggtatata
ttgagaagtggcgtttcagggttccactgctattcaatatatggacgtcctccaggatgc
agggcctttgatcttgctcaaacaagactggcatttaagttgcggcgagataagttccat
tacatggcaatcacagacgagaagcaaagaataatgcctctgccagaggatctgcttcca
ggcagaggcaagcagctaatcgtgccagagtctgtattgcttgtaaatcccataaatcct
gatctcaaaggcgaggttgatgataaataccagtattcaatggacaacaaagatggcgga
cttcatggatggataggttccggccccattattgggttctggatcatcttccctagccat
gagtttcgaaatggaggtcctacaaagcaaaacctcaccgttcacactggccctacctgc
ttagctatgtttcacggaacccattatattgggaatgaaatcttagctcatttccaagaa
ggagaaacatggagaaaggtgtttggcccaatcttcgtatacttgaattcaacctctgat
gcatcaaaggcatacaacttgtggattgatgccaaaaagcagcggctgcttcaagaggca
gcatggccatatgattttgtgtcctcaccttattatcttactgctaacgaacgaggttca
gctactggaagatttttcgtccaagacaagttcgtttccagttcattgattccggctaaa
tatgcatacataggtctatcatccgcaagaaccgaaggaggatggcaaacagagagcaag
gattatcagttctgggtacaaacagattccaagggaaatttcaccgtcaagaatgtagtc
cctggagtctatggactccatggttgggttccaggtttcattggtgattaccttgacaaa
gcacttgtcaacatctctgcagggtcacaaacagaacttggaaatttaacctatgttccc
ttgagaaatggtccgaccgtatgggagattggcttccctgatcgtacagctctaggttgc
tatgttcctgatgtgaatccaatgtatgtaaacaagttatttcttaacagccctgagaag
tacaggcaatatggcttatgggacagatacaccgacatacatcctgaatctgatcaagtt
ttcaccgtaggtgttaatgatcccaaaaaggactggttctttgctcatgtagacaggatg
gggccagataacaagtatcttccaacaacatggactatcaaatttcatcttgattctata
atcaaaggaacttataatctgaggttggctatagcatcagcaactcgttctgatcttgag
atttttgtcaactatatagaccaaggtcacctggtgtaccaagaaatgaacctggggatg
gataacacagtttgtcggcatggaattcatggactgtaccagctatttagcattcatgtt
tcctcgttactgctcataaagggagataactccatgtttcttgtacagtccaggagtgga
gatccagtttgtggagtactatatgactatctaaggctagaagcgcctacatcttcttca
tga
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