Citrus x clementina (clementine): CICLE_v10017883mg
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Entry
CICLE_v10017883mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00040
Pentose and glucuronate interconversions
cic01100
Metabolic pathways
Module
cic_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CICLE_v10017883mg
Enzymes [BR:
cic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
CICLE_v10017883mg
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
NosD
ZirS_C
Motif
Other DBs
NCBI-GeneID:
18051375
NCBI-ProteinID:
XP_006447721
UniProt:
V4UF89
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
SHKEQIWISKNLKHRPQKQRPQKVLTVVRQPEPDAARSQGAVFYVLSMEQRPMATQMIAI
ASAWKEACTSENLSTVVISKGNYMVGSVTFKGPCKSPITLHIEGKLKAPVELERLSSQDG
WIVFQDIDGLQVSGGGTFDGQGSAAWAKNDCRKTGKCSSLPINLRFSSVTNSKMQDVTSL
NSKLFHINILNCKNLSLQHISINAPANSLNTAGIHIGRSNGVHITDADIKTGDDCVSLGD
GSQQISIEKVTCGPGHGISVDTLGRYHDEQPVNGVTVRNCTLKNTMNGVRVKTWPDSPSG
VASEMTFEDIIMDNVSNPILIDQKYCPYGECKAKILK
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
agtcacaaggagcaaatttggatttccaaaaacctgaagcacaggcctcagaagcagagg
cctcaaaaggttttaactgttgtcagacaacctgaaccagatgccgcgcgatcacaaggt
gcagttttttatgttttaagtatggagcaaaggccgatggcaactcagatgatagctatt
gcaagtgcctggaaagaggcatgcacatctgaaaatctgagcactgttgtaatttcgaaa
ggaaactacatggttggttcagtaacgttcaaaggaccctgcaaatctcctataactctt
catattgaaggaaaactgaaggccccagtagaattagaaaggctcagttcacaggacgga
tggatcgttttccaggacattgatgggttacaagtctctggaggaggaacatttgacggt
caaggatcagctgcttgggctaaaaatgattgccggaaaactggaaaatgcagttcttta
ccaataaacttgagattttcttcagtcaccaattcgaagatgcaagacgtaacttcactt
aacagcaagctgtttcacattaacattttgaattgcaagaacttgagccttcagcatatt
agcatcaatgcaccagcaaacagcctaaacactgctgggatccacattggtcgatcaaac
ggggtccacatcactgatgcagacattaaaactggggatgattgtgtttcacttggcgat
ggaagccaacaaataagcattgaaaaagtgacctgtggccctggccatggcatcagtgtt
gatacccttgggagataccatgatgagcaacccgttaatggagttacagtgagaaattgc
actctcaaaaacacaatgaatggtgttagagtcaagacttggccagattcgcctagtggt
gttgcgtcagaaatgacttttgaggacatcatcatggacaatgttagcaatcctattcta
atagaccaaaaatactgcccttatggtgaatgcaaagctaagatacttaaataa
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