KEGG   Citrus x clementina (clementine): CICLE_v10018257mg
Entry
CICLE_v10018257mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K19038  E3 ubiquitin-protein ligase ATL41 [EC:2.3.2.27]
Organism
cic  Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:cic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cic04121]
    CICLE_v10018257mg
Enzymes [BR:cic01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     CICLE_v10018257mg
Ubiquitin system [BR:cic04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    CICLE_v10018257mg
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-ANAPC11 zf-C3HC4_3 zf-RING_16 zf_RING_Vps8_fungal zf-RING_6 DUF1272 PHD_NSD FANCL_C zf-RING-like PAC_M Zn_ribbon_IFT122_C zinc_ribbon_16 zf-RING_10 zf-Nse zf-RING_4 zf-C3HC4_4 Prok-RING_4
Other DBs
NCBI-GeneID: 18051518
NCBI-ProteinID: XP_006446749
UniProt: V4W247
LinkDB
Position
Unknown
AA seq 237 aa
MSIGDGDDDHKNPYSLNSKIMVTAIFSLSIVIVVVLLLHIYARCVLRRQARRRSVIRSLD
LVNNRVTHSTETPPPPKTGLDPTVIAALPIFVYKQTDGGQDDGLAAAIECAVCLSNLENE
EMARVLPNCNHTFHAECIDKWLGSHSTCPICRTGAEPRPQPESREGPVSVAPTAPPLLVS
AEGTSSNSVNNNGVEANSAKVTAGSSSRLSSFRRILNGDWDRSSRRLQFEIADLERQ
NT seq 714 nt   +upstreamnt  +downstreamnt
atgagcatcggtgatggcgacgacgatcacaagaacccttattctctcaacagcaagatc
atggtaactgccattttttcactatcaatcgtcatagttgtggtcctattacttcacata
tacgcaaggtgtgtgcttcgtcgtcaagccagacgccgttcagtcatccgcagccttgac
ctagtcaacaaccgtgtgactcactccacggagacaccaccaccacccaagactggcctc
gatccgactgtcatcgccgccttgcctatattcgtttacaagcaaacggacggcggccag
gacgatggtttggcagctgcaatagagtgtgcggtttgtttgagcaatcttgaaaatgaa
gagatggctagagtcttaccaaattgcaaccacacgttccatgcagagtgcattgacaag
tggttggggtcgcattccacgtgtcccatttgccgcaccggggctgagccacggccgcag
ccggaatcccgtgagggtccggtcagtgtcgcacccacggctcccccgttattggtttct
gctgaagggacttcttcaaatagtgtaaataataatggggtcgaagcaaattcggctaaa
gttacagcagggtccagttcaagattgagttcttttagaagaatacttaatggggactgg
gacagatcatcaaggaggcttcaatttgagattgctgatttagagagacagtga

DBGET integrated database retrieval system