Citrus x clementina (clementine): CICLE_v10018290mg
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Entry
CICLE_v10018290mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CICLE_v10018290mg
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cic01007
]
CICLE_v10018290mg
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cic03016
]
CICLE_v10018290mg
Enzymes [BR:
cic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
CICLE_v10018290mg
Amino acid related enzymes [BR:
cic01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CICLE_v10018290mg
Transfer RNA biogenesis [BR:
cic03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CICLE_v10018290mg
Prokaryotic type
CICLE_v10018290mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
18051376
NCBI-ProteinID:
XP_006447722
UniProt:
V4U4U1
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
SGTSPSITNPICNSNKATRYASRKISNFNADTMLWAVKKISTVLDRECISQNGPNPNSMK
FGGREAPATMWFIVQRMATASLLSSSFFISKPPSPSSLFFHLPVKQFVSSSAQFRQRYGA
VVSATSVATEPAETPSVTQNGKVEQAQMTSETEKVVLPTNESNEQLLRIRHTCAHVMAMA
VQKLYPDAKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLVREEVSRDE
AKSRIMAIKEPYKMEILESEEWWDLCAGPHVETTGKINKKAVELESVAGAYWRGDEKKPM
LQRIYGTAWENEEQLKAYLHFKEEAKRCFLSKLIIAILHTITVYNGYDFVKDEAGGGLVF
WHPKGSIVRHIIEDFWKKSHIEHGYDLLYTPHVAKADLWKISGHLDFYRENMYDQMNIED
ELYQLRPMNCPYHILVYQRKLQSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDA
HIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGNDIWEKATSALRDA
LDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEK
KRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKT
NGIRAEICHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFI
SRIKSATENRTTM
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
tcaggcacaagcccttcaattaccaaccctatttgtaactcgaataaagctacgcgatat
gcttcacgaaagatttcaaatttcaatgcggatacaatgttatgggctgtaaaaaagatt
tcaactgtattggatcgggaatgtatttcccaaaatgggccgaatccaaactcaatgaaa
ttcggaggccgtgaggcgccggcaaccatgtggttcattgtccagagaatggccacagct
tctctcttgtcatcttctttcttcatctccaagcctccgtcaccatcctcactctttttt
cacttgcctgtaaagcaattcgtttcgagctcagcccagttcaggcaaagatatggggcg
gtggtctctgctacttcagtggccactgagccagctgagacaccatccgtgactcaaaac
ggcaaggtggagcaggcccagatgacttctgagactgaaaaagtcgtgcttcccactaat
gagtccaatgagcagctcttgagaattcgccacacgtgtgctcatgtgatggccatggct
gttcaaaagctatacccagatgcaaaagtgacaatagggccttggatagaaaatgggttc
tactatgattttgatatggagcctttgactgataaggatctgaagaggatcaagaaagag
atggatcgcatcattggtcgaaatttaccacttgtgagagaagaagtctccagagatgaa
gctaaaagcaggataatggctattaaagaaccttacaaaatggagattttggaaagtgag
gaatggtgggacctttgtgctggacctcatgtcgaaactactggtaaaataaacaagaaa
gctgttgaacttgagtctgttgcgggggcatactggagaggagatgagaaaaaaccaatg
ctgcagaggatctacggaacagcatgggagaatgaagaacagttaaaagcttaccttcac
tttaaagaagaggccaaacgttgctttctttcaaaactgataattgctatattgcatact
ataactgtatataacggatatgattttgtgaaggatgaagctggtggaggtttagtattt
tggcatccaaagggttcaattgttcggcacatcattgaggatttttggaagaaatcacat
atagaacatggttatgatttgctatatactccccatgtggccaaggcggacctctggaag
attagtggtcatctggacttctacagagagaatatgtatgatcagatgaacattgaagac
gaactttatcagctccgtcccatgaattgcccttaccatattttggtttaccagaggaag
cttcagtcatatcgtgattttccaatccgggttgctgagctgggaacagtatatagatac
gagttgtctggaagcttacatggccttttccgtgtaagaggtttcacccaggatgatgct
cacatattttgtttagaggatcaaataaaagatgaaattagggctgttttagatcttaca
gaagagatattactacaatttggtttcaacaaatatgaagtgaacctctcaactaaacca
gagaaagctgttggaggtaatgatatatgggagaaggcaacatctgcccttagagacgct
ttggatgataagggatgggattaccaaattgatgaaggtggtggtgcgttttatggtcca
aagattgatcttaagattgaggatgctcttggaaggaagtggcagtgctcaaccatacag
gttgatttcaatttaccacagcgatttgacattgtgtatgttgactcaaactcagaaaag
aagcgtcccatcatgatccacagagcagtgcttggatccttggaacgtttctttggagtt
ctaatagagcattatgctggggattttcctttgtggctttctccaatccaagctcgtgtt
ttaccagttacagacacacagcttgagtactgtaatgaggtgataaaaaaactgaaaact
aatggtatacgagctgaaatttgccatggtgagcgcctgcctaagctcattagaaatgca
gagaaacagaaaattccattaatggcagtcgttggagctaaggaagttgatgcacaaact
gttacagtcagatctaggtttggtggagagcttgggaccatgaaagttgatgattttatc
agcagaatcaagtctgccactgaaaacagaactacaatgtaa
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