KEGG   Citrus x clementina (clementine): CICLE_v10018414mg
Entry
CICLE_v10018414mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CICLE_v10018414mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cic03019]
    CICLE_v10018414mg
   03041 Spliceosome [BR:cic03041]
    CICLE_v10018414mg
Messenger RNA biogenesis [BR:cic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     CICLE_v10018414mg
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     CICLE_v10018414mg
Spliceosome [BR:cic03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    CICLE_v10018414mg
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_Nup35
Other DBs
NCBI-GeneID: 18051220
NCBI-ProteinID: XP_006446597
UniProt: V4U1S6
LinkDB
Position
Unknown
AA seq 217 aa
MDPESNEGIVDRDSNDVHKSSDHHPEDDRSQPHTGDGASPGKIFIGGLARETSSAQFIKH
FGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGA
VGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTE
QAVDDLLAKGNKLELAGAQVSKLPAKTVSIISKSSTW
NT seq 654 nt   +upstreamnt  +downstreamnt
atggacccagaatctaatgaaggaattgttgacagagattctaacgacgttcataaatcg
tcagaccaccacccagaagatgacaggtctcagcctcacaccggtgacggagccagccct
ggaaaaatttttattggaggtttagctagagagacgtcgtcagctcaatttatcaagcat
ttcggtaaatatggtgaaattacggattctgtgataatgaaggaccggaaaacggggcag
cctcgtggatttggctttgttacttatgctgatccctctgtagttgataaagtcattgaa
gacactcacattattaatgggaaacaggtggaaattaagcgaacaattccaaaaggggct
gttggctctaaggatttcaagacgaagaagatttttgtaggtggaattccgtcatcggtg
aatgaagatgaatttaaggacttctttatgcaatttggagaggtacaagagcaccaaatc
atgcgggatcattctaccagtcgatctcgtggttttggatttatcacttttgacacggag
caagcagttgatgaccttttggcaaagggtaacaagcttgagttggctggagcccaggtg
agtaaactgcctgctaaaactgtctctattatttctaaatcttctacttggtga

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