Citrus x clementina (clementine): CICLE_v100184242m Help Entry CICLE_v100184242m CDS       T02982                                  Name (RefSeq) hypothetical protein   KO K19525   vacuolar protein sorting-associated protein 13A/C Organism cic  Citrus x clementina (clementine) Brite KEGG Orthology (KO) [BR:cic00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cic04131]     CICLE_v100184242m Membrane trafficking [BR:cic04131]  Endosome - Golgi transport   Rab GTPases and associated proteins    Rab associated proteins     CICLE_v100184242m BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps62 VPS13_M VPS13_VAB PH VPS13_N Motif Other DBs NCBI-GeneID:  18048233 NCBI-ProteinID:  XP_006440132 UniProt:  V4TJ12 LinkDB All DBs Position Unknown AA seq 2900 aa AA seqDB search MTIDGVKRTAQEQVNRALKDHARFLLDLDIAAPKITIPTEFRPDDTHSTNLMLDLGNLVI RSQDDYERESSNELDMYLQFDLVLSDISAFLVDGDYHWSENSNKSSASTHKSGASFLPVV DKCGVILKLQQIRLENPSYPSTRLAVRLPSLGFHFSPARYHRLMQILKIFQEDRLVIPTY LEGCPLFLFLSGVGNREAVWQRRYFCLVGPFLYVLESPGAKSYKQYLSLRGKQIYQVPSE AVGGVEYVLAVCDAARSNSKVVEDVNALILRCDSDDSRKTWKSRLQGAKYSASGTAPITG LSETSSDSEDSERETNKNPDAFEILKIERVFITGALDELKIFFNYSHQHDHSFMKILLAE EMRLFEFRAIGGQVQLSVRSNDMFIGTVLKSLEIEDLVGIHGVSRHCYLARSFIHSSDAH LSSDEPAIRSVDSNDLTLSEGEKFYEAPEDLVDSADHAMQSPQTVSKNLSSQIWLPSENL SLKTPSFGRLAGLVPDDTVENRMEDAEVTETLDSFVKAQIVIYDQNSPLYHKIDKRVTVT LATLSFFCRRPTILAIMEFVNSINTEGDSCESFSDTSSAAIENFSGGVVDDQHLMAIEEP PVKGLLGKGKSRVIFNLTLNMAHAQIVLMNEDGTKLATLSQDNLLTDIKVFPSSFSIKAA LGNLRVSDDSLPDSHMYFWICDMRNPGGTSFVELVFTSFNVEDEDYEGYEYCLFGQLSEV RVVYLNRFVQEVVSYFMGLVPNSSKGVVKLKDQVTDSEKWFMTSEIEGSPAVKLDLSLTK PIILMPRRTDSPDYLKLDVVHITVQNTFEWLSGSKNELNAVHLEILTILVEDINLNVGTG SDLGESIIQEVKGVSVVLRRSLRDLFHQIPSTEAAIKIEELKASLSNQEYQIISECAVSN FSETPRTMPPLNNFATSSEDVIESVIPQAPAGIESRTLDRELWITVEVSVAINLVELCLH AGVTGDASLASVKVSGVWLLYKSNSLGEGFLSATLKDFSVIDNREGTEEEFRLAIGKPEN IGYGPLKLLFDDEQWIDANVKKENDFKLVTTMLILDAKFRQNSSFISVSLQRPQLLVALD FLLAVVEFFVPSVGSLLSSDEDKSPMPVVDAIILDQSIYSQPSSEFSLSPERPLIADDER FDNFVYDGKGGVLYLKDRQGFNLSQPSTEAIIHIGSGKKLQLKNVVIKNGLFLDSCILLG ANSSYSASKEDGVYLEGGDEDPLQNRASENVNGSPSQNSAVDRSVELIIEFQAIGPELTF YNASKDARELPMLSNKLLHAQLDVFSRLVMRGDTLEMTANVLGLAMESNGIRILEPFDTS LTYSNASGKTNIHISVSDIFMNFSFSILRLFLAVEEDILTFLRTTSKKMTFVCSQFDKVG TIRNSLSDQVYAFWKPHAPPGFAVLGDYLTPLDKPPTKGVLAVNTNFARVKRPVSFKLIW SPSAGVISDEGISNYDSRPNSVLSEGDHCCSVWFPEAPKGYVAMGCVVSPGRTPPSLSSV FCISASLVSPCSLRDCITISPTDMCPSSLVFWRVDNSVGTFLPVDPLTFSISGRAYELRQ MIFGFPEVSSKASAHSSGRASTSHVHSAQMQESGVVNSGRHFEAVASFQLIWWNRGSISK KKLSVWRPIVPEGMVYFGDIAVKGYEPPNTCIVLHDTGDDELFKIPLDFQVVGQIKKQRG LENISFWLPKAPPGFVSLGCIACKGTPKQYDFTRLRCIRSDMVTGDQFLEESVWDTYDAK LRVEPFSIWIVGNELGTFIVRSGSKRPPRRFALKLADLNVPSSSDDTVIDAEVKTFSAAL FDDYGGLMVPLFNISLSGIGFELHGRTDYQNSTVSFSLAARSYNDKHESWEPLVEPVDGF LRYQYDPNAPGAASQLRLTSTGDLNLNVSVSNANMMIQAYASWNNFNHVHKYDSTREAFS PTYGGQSIIDIHHKRNYYIIPQNKLGQDIFIRATEIRGYSNVTRMPSGDMKPVKVPVSKN MLDAHLKGKTCRKARRMVTLIVFDAQDYYTIEVIVTDMGKGEPVGFFSAPLNEMAVDVED YVYQDDYLNNLTWIDLCSTESMSPCGRVRCAVLLSPKSEVEDKDETAIGGRKSGFIQISP STVGPWTIVRLNYAAPAACWRLGNDVVASEVVVKDGNRYVNIRSLVSVLNNTGFVLDLCL VSKASREQMRTQQLNDTLPLPLSGLTQSGLFVLQLRPSNLDGPDQFSWSSVVDRSGHLED SGRREVSSEICVSSLMESEELLYCNQISGTSSSGCQKLWFCVSIQATEIAKDIHSDPIQD WIIIVKAPLSITSYLPLAAEYSILEMQASGHFVACCRGVLTPAKAVKVHNADLRNPMFLS LLPQRGWLPIHEAVCISHPQGVPSKTLSLRSSISGRIVQLILEQNYDKEHQPLAKVIRVY APYWFEIARCPPLTIRLLDSGKKHTRKISFPFQSRNFTEVVFEDITEEEIYEGHTIASAL NFNLLGLSVSISQAGNDHFGPIKDLSPLGDMDGSLDLCAHDADEKCMRLFISTKSCPYQS VPTKIICIRPFMTFTNRLGQDIFIRLNDEDEPKVLRASDSRVSFVRQEDTKWSYPVQILK EDTFSLVLRSHDGTQRFFRTEVRGYEEGSRFIVVFRLGSTNGLIRIENRTFGRKISIRQS GFGEDAWIQLEPLSTSAFSWEDPYGQKSIDAKIDSCGTIGVWRLELERTGLYSAEHELGL QFHVLEMGSIKVARFTEVSISSSHEEIRSLTPGNWGTSRMQRETQHNSSPIELIVELGVV GLSVVDHRPKELSYLYLERVFVSYSTGYDGGATSRFKLILGHFQIDNQLPLTLMPVLLVP EQATDMHHPVFKMTITVRNENTEGIQVYPYVYIRVTDKVWRLDIHEPIIWAFVDFYRNLQ LNRVPESTSVTQVDPEIRLV NT seq 8699 nt NT seq  +upstreamnt  +downstreamnt atgacaattgatggagtcaagcgcactgcacaggagcaagtgaacagggctctgaaggat catgccaggtttctgctggacttggatattgctgctcccaagattacaattccaactgaa tttcgtccggatgatacccattcaacaaacctcatgctggacttgggaaatttggttatc cgttcgcaggatgactatgaaagggaatcatctaacgagctggatatgtatttgcaattt gatttggttttgagtgatatatctgcttttctggttgatggtgactatcattggagtgag aactcaaacaaatcttctgcttccacccacaaaagtggtgctagttttttacctgttgtt gataagtgtggggtaatcttaaaacttcaacagattcgattagagaacccttcctaccct tctacaagacttgctgtacggcttccatcactagggtttcacttttccccagctcgatat catcggttgatgcagatattaaaaatatttcaggaggataggttggttatccctacttac ttggaaggttgccctctcttcctctttttgtctggtgttggaaatagggaagctgtgtgg cagcggcgatacttttgcttagtcgggcctttcctttatgtgctagagagccctggtgct aaatcttataaacaatacctcagtttacgagggaagcaaatatatcaggttccatcagaa gcggttggtggtgtggaatatgtattagctgtctgtgatgctgcccgatccaatagcaag gttgtagaagatgtaaacgcacttatattacggtgtgattctgatgattcaaggaaaact tggaaaagccgattgcaaggggctaaatatagtgcttcgggtactgctccaatcactggt ctatcagaaacttcatcagactccgaggattcagagagagaaactaacaagaatcctgat gcctttgagatcttaaagatagagagagtgtttattaccggtgctcttgatgaactgaaa attttcttcaattatagtcatcagcatgatcatagtttcatgaagattcttcttgctgaa gaaatgcgactatttgaatttcgagccataggtgggcaggttcaactttcagtacgttcg aatgatatgttcattggcactgttttgaaatctttggagattgaagatttagttggcatc catggagtatctcggcattgttacctggcaaggtcattcatccacagttcagatgcacat ttatcttccgatgagcctgcaattcgaagtgttgatagtaatgatctgactctaagtgaa ggagaaaaattctacgaggcaccagaagatttggttgactctgcagatcatgctatgcag tcaccacaaacagtatccaagaacctaagctcccagatttggctaccatctgagaactta tcgctcaagacacccagttttggtcgtcttgctggtttagtccctgatgacacagttgaa aataggatggaggatgctgaagtaacagaaacattggatagttttgtgaaagctcaaata gttatctatgaccagaactctcctttgtatcataagattgataagagggtgacggtgacc ctggccactttgtcatttttctgtcgtagacctacaattcttgccattatggaatttgtc aattctatcaatactgaaggtgatagctgtgaatctttcagtgatacttcttcagcagct attgagaatttttctggaggtgtggttgatgaccaacatttgatggccattgaggaacct cctgtcaaaggtctgcttgggaaggggaaatctcgagttatttttaatttaacattgaat atggcacatgctcaaattgtactaatgaacgaggatggaactaagcttgctactttgtcg caggataatctgctcaccgatattaaggtgttcccgtcatctttcagtataaaggctgcc ctgggaaatctgagagtgagtgacgatagtcttcctgacagccatatgtatttctggatc tgtgatatgagaaatccaggaggcacttcatttgttgagttggtttttacttcattcaat gttgaggatgaagactatgaaggttatgaatattgcctttttgggcagctttcagaagta cgcgttgtttatttgaatcgctttgtccaggaggttgttagttactttatgggccttgtt cctaatagttcaaaaggtgttgtcaaattgaaagatcaagtaacagattccgagaagtgg tttatgactagtgaaattgaaggatcacctgctgtaaagttggatctttcactgacaaaa cccataattttaatgcctcggagaacagacagtcctgattacttgaagcttgatgtggtt cacataactgtccagaatacctttgagtggttgtctgggagtaaaaatgagctgaatgcc gttcatctggaaattttgactattctggttgaagacatcaatctaaatgttggtactgga tcagatttaggtgaaagcataattcaagaagttaagggtgtttctgttgttcttcggagg tcactcagagacttgttccatcaaatacccagtacagaagctgcaatcaagatagaggaa cttaaagcttcactgtcaaaccaagaataccagataataagcgaatgtgcagtgtctaat ttttctgagactccacgtacgatgcctccattgaataactttgcaacatcttctgaagat gttatagaatctgtcattcctcaagctccagctggcattgaatctcgaactctagatagg gaactctggattacagtggaagtttcagttgccattaatttggttgaattgtgcttacat gcgggggtaactggagatgcatctttggcctcagtgaaggtaagtggtgtgtggctactt tacaagtctaatagtttgggtgaaggttttctatcggcgacacttaaggatttcagtgtg atagataaccgtgaggggactgaagaagaattcaggttagcaataggaaagcctgagaac attggttatggtcctctaaagttactcttcgatgatgaacagtggattgatgcaaatgta aaaaaagagaacgactttaagctggttactactatgcttattcttgatgccaagttcaga caaaactcatctttcatttctgtatctctccaaaggccacaactactggtggcactcgat ttcctgctggcggtggttgaattttttgttccctcagttggtagcttgctgtcaagtgat gaggataagagccctatgcctgtagttgatgcaatcattctggatcagtcaatttacagt caaccttcttctgaattctcactatctcctgagagacccctaattgctgatgatgaaaga tttgataattttgtttatgatggtaaaggtggagtactgtacttaaaggataggcaaggg tttaatctttcacaacctagtacggaggctataatccatattggaagtggtaaaaaattg caactcaaaaatgttgtcatcaagaatgggttattcttggattcctgtattttgcttgga gccaacagtagctattctgcttcaaaggaggatggggtctatcttgagggaggggatgaa gatcctctccagaaccgtgcaagcgaaaatgtcaatggttcaccatcccaaaactctgca gttgatagatctgtggagttaatcattgagtttcaggctattggcccagagttaaccttt tacaatgcatccaaagatgcgagggaattgccgatgctttccaacaaacttttgcatgcg cagttggatgtctttagcagacttgttatgagaggcgatacccttgaaatgactgcaaat gtacttggtttggcaatggagagtaatggaatcagaattctggagccttttgatacctct ttaacgtattcaaatgcatctgggaagaccaatatacatatatctgtttcagatatattc atgaacttttcattcagcattttgagactatttttagcggtcgaagaggacattttgact tttttgaggacgacatcaaagaagatgacttttgtctgttcgcagtttgacaaagttggg actattagaaattccttgagtgatcaagtatatgccttctggaaaccccatgcaccccct ggctttgcagtcctcggtgactatctgactccattggacaaaccacctactaaaggagtt cttgccgtcaatactaactttgcaagagtcaaaagacccgtatcttttaaattaatttgg tcaccttcagctggggttatatctgatgaaggtatatcgaattatgattcacgaccaaat agtgtcctcagtgaaggagaccattgctgttctgtttggttcccggaagcacccaaaggt tatgttgcaatgggctgtgttgtttccccaggaagaacaccaccgtcactgtcttctgtt ttctgcatctcagcttctctagtatctccttgttccctaagggattgcattaccatcagc cctactgatatgtgtccatcaagcttggtattttggcgtgtggataattctgttggaact ttcttgccagtagatcccttgactttcagcatttcaggtagggcatatgaactgcgtcag atgatttttggttttccagaagtctcttcaaaagcatctgcgcattcctctggccgagct tctaccagtcatgttcactcagcacaaatgcaagagtcaggagttgtaaactcaggtaga cattttgaagctgttgctagtttccagttgatatggtggaataggggttcaatctcaaag aagaaattatccgtgtggcgtccaatagtccctgagggtatggtatattttggagatatt gcagttaaagggtatgagccgcccaatacatgcattgttcttcatgatactggagatgat gaacttttcaaaattcctttggatttccaagttgttggacagatcaagaagcaaagggga ttggagaatatttctttctggcttcctaaagctccacctggttttgtttctttaggttgc attgcatgcaagggcacaccaaaacaatatgatttcaccaggttaagatgtatacgcagt gatatggtcactggggatcaatttttggaagaaagtgtatgggacacttatgatgccaag cttagagtggaaccttttagcatatggattgttggcaatgagttggggacctttattgtc cgcagtggctccaaaagacctcctaggaggtttgccttaaaactggcagatctgaatgtt ccaagtagttcagatgatacagttattgatgcagaagttaaaacattttctgcagcactt tttgatgattatggtggcttgatggtccctttgtttaacatctcactgagtggaataggg ttcgagttgcatgggagaactgactaccagaattccaccgtcagcttttctctggctgca agatcatacaatgataagcatgaatcttgggagcctcttgttgagccggtagatggattt ttaaggtaccagtatgatcccaatgcgcctggtgcagcttcgcagttacgtcttacctcc actggggatctgaacttgaacgtatctgtgtctaatgctaatatgatgattcaagcatat gcgagctggaacaattttaatcatgtccacaagtatgatagcacgagggaagctttttcc ccaacttatggtggacaatctatcatcgatatccatcacaagagaaattattatataatc ccacaaaacaaacttggtcaggacatttttattcgagctactgaaatcagaggatattcg aatgtaactagaatgccatctggggatatgaagcctgttaaagttcctgtttcaaaaaat atgttggatgctcatttgaagggaaaaacttgcagaaaagctaggagaatggtgacactt attgtatttgatgcacaggattactacacaattgaagtaatagtgactgacatgggaaaa ggtgaacctgttggattcttttcagctccattgaatgagatggcagtagatgttgaggac tatgtatatcaggatgactacttaaataacttaacctggatagacttgtgctcaacagaa tctatgagtccgtgtggtagagtaagatgtgctgtactcttgtcccccaaatctgaagtt gaggacaaagatgaaactgctattggtggcagaaaatctggatttattcagatcagtcct agcacggtgggcccgtggactattgtgaggctaaactatgctgcgcctgctgcttgttgg cgcttaggcaatgatgttgttgccagtgaagtagttgtcaaggatggcaatagatatgta aatattaggtctctggtttcagtacttaataatacaggttttgtacttgatttgtgcctt gtgtccaaagcttccagagaacagatgaggacacagcaactaaatgacacactgcccctt cctttatcaggcttgacccaatcgggactctttgtcctgcaattaaggccttcaaatctt gatggcccagatcaattctcttggagctctgtcgtggatagatctggtcatctagaggat tccggtagacgcgaggtctcctctgaaatttgtgtatcaagtctcatggagtccgaggag ctgttgtattgcaaccagattagtggaacttcttccagcggttgtcagaaattgtggttc tgtgtaagcatacaggcaacagagattgcaaaagacatccattctgatcctattcaggac tggattattatagtcaaggccccattatctatcaccagttatcttcctcttgcagctgaa tattctattcttgagatgcaagcaagtggccattttgttgcctgctgtagaggagtactt actccggcaaaagctgtcaaggttcacaatgctgacttgagaaaccctatgttcctttct cttcttccacaaagaggatggctgccaatacatgaagctgtttgtatatctcatcctcaa ggagttccatctaaaacattgagtttgagaagttcaatttctggaaggattgttcaactt attcttgaacaaaattatgacaaggaacaccagccactggcaaaagttatcagagtctat gctccttattggtttgaaattgccagatgtccaccacttacaattaggcttctggattca gggaaaaagcatacacggaaaatttcctttccatttcagtctagaaacttcactgaagta gtttttgaggatataacggaagaggaaatatatgaaggtcatacaatagcttcagctttg aactttaatctattgggtctctcagtgtcgatcagtcaagctggcaatgatcattttgga ccaatcaaagatctttctcctcttggtgacatggatggatcactggatctctgtgctcat gatgctgatgaaaaatgtatgcggcttttcatttctacaaaatcttgcccctatcagtct gtacccacaaagataatatgcattcgaccatttatgactttcacaaatagacttggtcaa gacatatttattaggctgaatgatgaagatgaaccaaaggttcttcgtgcatctgattca agagtctcctttgtacgacaggaagatacaaaatggtcatatcctgttcagattctgaag gaggacaccttctcgctggttttgaggagtcatgatggcacacagagattttttaggaca gaagtacggggatatgaagaaggatctcgttttatagttgtattccgccttggatcaacc aatggtcttatcaggattgaaaaccggacatttggtagaaagatcagcattcgtcagtca ggatttggtgaggatgcatggattcagttagaacctctttcaacctcagctttttcttgg gaagatccttatggccaaaaatctattgatgcaaagattgatagttgtggtaccattgga gtttggagactcgaattagaaaggactgggttatattctgcagagcatgaactaggatta caattccatgttctagaaatgggttccatcaaggttgcgaggtttacagaggttagcata tcaagttcacatgaagaaatcaggtcactgacacctggaaattggggaacttctcgcatg cagagagaaactcagcacaactcttcaccgatcgagctaatagttgagctgggagttgtt gggctttctgtagttgatcacagacctaaggaactttcttacttgtacttggagagagtt tttgtgtcatattcaactggctatgatggtggagcaacaagcaggttcaagctcatacta ggtcatttccagattgataaccagctccctctcactttgatgccagtgcttttggtacct gagcaggctactgatatgcatcatcctgtttttaagatgacgattacagtacgcaatgag aatactgagggcattcaagtatatccatatgtatatattcgggtaaccgataaggtgtgg agacttgacattcatgaacccattatctgggctttcgtagatttctacagaaatcttcag ctcaaccgtgtccctgaaagtacaagtgtcacgcaagttgatccagagattcgcctggt

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