Citrus x clementina (clementine): CICLE_v10018438mg
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Entry
CICLE_v10018438mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CICLE_v10018438mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10018438mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10018438mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CICLE_v10018438mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
CICLE_v10018438mg
Chromatin remodeling factors
BAF complex
CICLE_v10018438mg
PBAF complex
CICLE_v10018438mg
GBAF(ncBAF) complex
CICLE_v10018438mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
QLQ
HDA2-3
AAA_14
Motif
Other DBs
NCBI-GeneID:
18047559
NCBI-ProteinID:
XP_006445002
UniProt:
V4TXF3
LinkDB
All DBs
Position
Unknown
AA seq
1953 aa
AA seq
DB search
MQSGGGPSRNRAASTSSAASPSSSSSAVSTPHLGFDSLQQQQQHQQQQQRQPFQQQILRK
PDGNEAILAYQVGSLPGLMGGGNFASPPGSMQPPQQSRKFFDFAQQHAISQESQNRSQGV
EQQLLNPVHQAYMQYALQAQQKSASVLQSQQQAKLGMLGPASGKDQDMRMGNLKMQELIS
MQSANQAQASSSKNSSEQFVRGEKQMEQPQQQVSDQKGEPKPPSQQTLGGQGMAANIIRP
MQAAQHQQSIQNAAGNQLAMAAQLQAWALERNIDLSQPANASLIAQLIPIMQSRIVANHK
ANESNMGAPSSPVPVSKQQVTSPTIAGENSPHANSSSDVSGQSGSAKARPTVSPSPLGST
TSAAVVNNVNNISLQQFSVHGRDNQVPSRQPVAIGNGLPPIHPPQTSLNMTPGVDQPLPV
KNSSGPENSQMQYLRQLNRSSPQSAIPSSDGSSANNFSSQGGLATQMPQQRLGFTKHQLH
VLKAQILAFRRLKKGEGTLPQELLRAIVPPSLELQQQPAQQQFLPAAVNNQDRVSGKIAE
DQLRHLESNGKDAQAVSSSNVQSLPKEEAYAGDDKAAVSPVGQGMSAVTKEPAPVVVPGK
EEQQAPVSSVKSDQEVECGLLRTQQQSDFPADRGKSVAPQVSACDAVQVKKPAQATTALQ
PKDVGAARKYHGPLFDFPFFTRKHDSVGSTAMVNSSNNLTLAYDVKDLLSEEGLEVLQKK
RSENLKKISGILAVNLERKRIRPDLVLRLQIEQKKLRLLDLQSRLRDEVDQQQQEIMAMP
DRQYRKFVRLCERQRVELMRQVQTSQKAMREKQLKSISQWRKKLLEAHWAIRDARTARNR
GVAKYHERILREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSS
FLTQTEEYLYKLGSKITAAKNQQEVEEAANAAAAAARLQGLSEEEVRSAAACAGEEVMIR
NRFLEMNAPRDGSSVNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKL
NGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIY
YVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESV
LARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPT
HNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIY
DWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSK
DFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSL
EDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHR
IGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQ
YKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARSED
EVELFDQMDEEFGWIEEMTRYDQVPKWLRASTKEVNATIANLSKKPSKNILFGSNIGVDS
GEIETERKRGPKGKKYPNYKEVDDEIGEYSEASSDERNGYPVQEEEGEIGEFEDDEYSGA
VGAPLSNKDQSEEDGPVCEGGYDYLRPSENTRNNHVVEEAGSSGSSSNSRRLTQIVSPVS
PQKFGSLSALEARPGSLSKRMPDELEEGEIAVSGDSHMDHQQSGSWTHDRDEGEDEQVLQ
PKIKRKRSIRVRPRHTVERPEERSCTDTPLHRGDSSLLPFQMDNKYPAQLRTDTEMKAHG
ESNSLRHDQSEPSSKSRRNLPSRKIANAPKSRASLKTGRLNCMPGHTEDAADHFKESWDG
KIANASGSSNFSAKMSDVIQRRVCTVSLLHYGF
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcgggtggtgggcccagccggaaccgggcggcatctacgtcgtcagcggcgtcg
ccgtcttcgtcatcatctgctgtttcgacgccccacttgggttttgattcgttgcagcaa
cagcagcaacaccaacaacagcagcagagacagcctttccaacaacaaatactaagaaaa
cctgatggaaatgaagccattttagcatatcaagttggaagtctccctggattaatggga
ggggggaattttgcttcacctccaggctccatgcaacctcctcagcaatctaggaaattc
tttgattttgctcaacaacatgctatatcgcaggagagtcagaatagaagtcaaggtgtt
gagcaacaactgctaaatcccgttcatcaagcttatatgcaatatgctttgcaggcccaa
cagaagtctgcttcagttttgcagtctcagcagcaagctaaattgggaatgttgggtcct
gcatctgggaaagatcaagacatgaggatgggaaatttgaaaatgcaggaattgatctcc
atgcaatcagctaatcaggctcaggcatcatcgtccaaaaattcatctgaacagtttgtt
cgtggtgaaaagcagatggaacaacctcagcagcaagtctctgaccagaagggtgaacca
aaacctcctagtcagcagacccttggtgggcaaggaatggctgctaatattataaggccc
atgcaggcagcacaacatcagcaaagcattcaaaacgcagccggtaaccaacttgcaatg
gctgctcagttgcaggcatgggcacttgagcgcaatattgatctctcacagcctgcaaat
gccagcttaatagcacagcttataccaatcatgcagtctagaattgttgctaatcacaaa
gcaaatgaaagcaacatgggtgcgccgtcatcacctgtcccagtatcaaaacaacaggtg
acatctccaaccattgcaggcgagaactctccacatgctaattcatccagtgatgtgtct
gggcaatctggttcagcgaaggcaagacctacagtttcccctagtcctcttggctcaact
accagtgcggctgtcgtcaataatgtaaacaacatttcattgcagcagttttctgttcat
ggcagagataaccaggttccttctagacagccggttgcaattggaaatggattgcctccg
atacatcctccacagacatctttgaacatgacaccgggtgtggatcagcctttgcctgta
aaaaattcaagtggcccagaaaattcacaaatgcagtacctcaggcagttgaatcgatct
tcaccgcaatctgcaattccttccagtgatggaagctcagctaacaacttttcgtcacag
ggtgggctggccacccagatgccacagcagcgtttagggttcacaaaacatcaacttcat
gttcttaaggcacaaattctagcatttaggaggctgaagaaaggagaaggtactctacca
caagagcttcttcgagctattgttccaccgtctcttgagttgcagcagcagccggcacag
cagcaatttcttcctgcagcagtaaataatcaggatagagtttctgggaagattgcagaa
gaccagttgagacatttggaatctaatggaaaggatgcacaagctgtgtcatcatcaaat
gttcaaagcttaccaaaagaagaagcttatgctggggatgataaagcagctgtgtcacca
gttgggcagggtatgtcggctgtgacaaaggaacctgcacctgtggtagtaccaggaaaa
gaagagcagcaggcccctgtatcttcagttaagtcagaccaggaagtagaatgtggtctt
ctgcgaactcaacaacaaagtgatttcccagctgatagaggaaagtctgttgcacctcag
gtttctgcatgtgacgcagttcaagttaagaagccagcacaagcaactactgccctccag
ccaaaagatgttggcgctgccagaaagtatcatggaccactatttgattttccctttttc
actagaaaacatgactctgttgggtcgacagcaatggttaatagtagtaataatctaaca
ttggcatatgatgtcaaagatctactttctgaggaaggcttggaagttctccaaaagaaa
agatcagaaaatttgaagaagattagtggcatattggcagttaatttagagagaaaaaga
atcaggccagatcttgttctgcggttgcagattgaacaaaaaaagcttagacttttagat
ctacagtcacgtttaagggatgaagttgaccaacaacagcaggagattatggcaatgcct
gacagacaatataggaagtttgtccggctgtgtgagcgtcagcgtgttgaactgatgaga
caagtacaaacatctcagaaggccatgagagagaagcaattaaaatccatctcacagtgg
cgtaaaaagcttcttgaggctcattgggccatccgtgatgcacggactgcccggaatcgg
ggagttgccaaataccatgagagaattttgagggagttctcgaagagaaaggatgatgat
cggaacaaaaggatggaagccttgaagaataatgatgttgagaggtatagggagatgttg
ctagagcagcagactagtatcccgggtgatgctgcagaaagatatgcagtcctctcgtca
ttcttgactcagactgaagaatatctttataaactgggaagtaaaataaccgctgccaag
aatcagcaggaagttgaagaggcagcaaatgctgctgctgctgctgcaagattgcagggt
ctttctgaagaagaggttaggtcggcagcagcttgtgctggtgaggaagtgatgatcaga
aatagatttctggaaatgaatgcccccagggatggttcatccgttaacaagtattatagt
cttgctcatgctgtgaacgaaagggtcatgaggcaaccctcaatgttacgagccggaacc
ttacgagattatcagattgttggattgcagtggatgctttctttgtataacaacaaatta
aatggaatattggcagatgagatggggcttgggaagactgtgcaggtgatggcactgata
gcttatttgatggaatttaaagggaactatggccctcatcttataattgtccctaatgct
gtattggtgaattggaagagtgagttgcataagtggctgccatctgtatcatgcatttat
tatgttggtgcaaaggatcaacggtcaaggttgttttctcaggaggtcgctgccctgaaa
tttaatgtccttgtgacaacttatgagttcatcatgtatgaccgctcaaaactgtcaaaa
gttgattggaagtatatcataattgatgaagcacaaagaatgaaagacagagaatcagtt
ttggcccgtgaccttgatagatatcgttgccagaggcgcttgcttcttacagggacgcct
ttacagaatgatttaaaggaactttggtcactcttaaatctacttcttcctgaagtgttt
gataatcggaaagcattccatgattggttttcacaaccatttcaaaaggaaggtcctaca
cataatgcagatgatgactggcttgagactgaaaagaaagttatcattatccaccgactt
catcaaatattggagccttttatgctcagacgccgtgttgaagatgtcgaaggttccctt
ccacccaaggtctcaatagttttaaggtgtagaatgtcagctattcagagtgctatttat
gattggatcaaagccactggtactcttcgggttgatcctgaagatgagaagagaagggtt
caaaaaaatcccatataccaggccaaggtgtataaaactcttaataacagatgtatggag
cttcgtaaaacttgcaatcatcctttgctaaactatccatatttcagtgacttatccaaa
gattttcttgtaaaatcatgtgggaaattatggatcctggataggatccttataaaactt
cagagaacggggcatagagtactgctgtttagcaccatgaccaagcttcttgatatcctg
gaggaatatctacaatggcggcaacttgtgtacaggcgaattgatggaactactagttta
gaagatcgtgaatcagctattgtggactttaatagccatgattcagactgctttatattc
ctgcttagtattcgtgccgctggacgtggtcttaatcttcagtctgctgacacagtcatc
atttatgatcccgatcctaacccaaaaaatgaggaacaggcagttgctagagcccaccgc
attggacagaaaagagaagttaaggtcatttatatggaagcagttgttgacaaaatttcg
agtcaccaaaaagaggatgaactaagaagtggaggtacagttgatttagaggatgatctt
gcaggtaaggatcgatatattggatctattgagggcctcataaggaataacattcagcag
tataagattgacatggctgatgaggtcatcaatgctggacgatttgatcagagaacaact
catgaagagaggcgtatgactttggagacattattacatgatgaggaaaggtaccaagaa
actgtgcatgatgttccatcactgcaggaggtaaatcggatgattgctagaagtgaagat
gaagtagaattgtttgatcaaatggatgaagagtttggttggattgaggagatgacaaga
tatgaccaggtaccgaagtggcttcgagccagtacaaaggaagtgaatgctactattgct
aatttatccaaaaagccatcaaagaatattttgtttggtagcaatattggtgtggattct
ggtgaaattgaaacagaaagaaaaaggggacccaaggggaaaaagtatcctaattacaag
gaagttgatgatgaaattggagaatattctgaagcaagctctgatgagaggaatggatat
cctgtgcaggaagaagagggagaaattggagagtttgaagatgatgaatacagtggtgct
gttggggcaccactgagtaacaaagaccaatcagaagaagatggtccagtttgcgaaggt
ggttatgactatctccggccttcagaaaacacaagaaacaatcatgtagttgaggaagct
ggttcttcaggatcatcttcgaacagtcgaagattgacacagatagtatctcctgtttcc
cctcagaaatttgggtctctgtctgcattagaagctaggccaggttctctttcaaagagg
atgccagatgagttagaagagggagagattgcagtatctggagattctcacatggaccac
cagcaatctggaagttggactcatgatcgtgacgaaggtgaagatgaacaggttttgcag
cctaagatcaaacgaaagcgtagtattcgagttcgaccccgtcatactgttgaaaggcca
gaggagaggtcttgcaccgacacacctctccatcgcggtgattcatctctcttgcccttc
caaatggacaacaaatatccagcacagttaaggactgatactgaaatgaaagcacacggg
gaatccaattctctcaggcatgatcaaagtgagccatcttcgaaaagtaggcggaactta
ccttcacggaaaatagctaatgccccaaagtcgcgtgcttcactgaaaactggtcgattg
aattgcatgcctggtcatacagaagatgctgctgatcacttcaaagaaagttgggatggg
aaaattgcgaatgctagtggttcctcaaattttagtgctaagatgtctgatgtcatccag
aggagggtatgtactgtatctctgctacattatggtttttga
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integrated database retrieval system
