Citrus x clementina (clementine): CICLE_v10018452mg
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Entry
CICLE_v10018452mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03255
protein TIF31
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cic03012
]
CICLE_v10018452mg
Translation factors [BR:
cic03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
CICLE_v10018452mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_MalT
TPR_8
CLU
Motif
Other DBs
NCBI-GeneID:
18047013
NCBI-ProteinID:
XP_006444841
UniProt:
V4TWZ4
LinkDB
All DBs
Position
Unknown
AA seq
1888 aa
AA seq
DB search
MAPRNSRGKAKNEKKKKEEKVLPVVLDITVNLPDDTRVILKGISTDRIIDVRRLLSVNTE
TCSITNFSLSHEIRGPRLKDAVDVAALKPCVLSLTEEDFDEEGAAAHVRRVLDIVACTTS
FGPCGFDAGKNVPDSKSAKKTTAKNEKDKQSQPPSSPQSKNSKSSNDVTVDGDGEMSHAF
PKLSSFYEFFSLSHLTPPLQFIRKAPKRRVEEISPDDHLLSLDVKLCNGKMVNVEACRKG
FYSVGKQRILCHNIVDLLGQLSRAFDNAYNELMNAFSERNKFGNLPYGFRANTWLIPPIA
AQSPSVFPPLPAEDEAWGGNGGGLGRDGKSDLIPWANEFLFVASMPCKTAEERQIRDRKA
FLLHNLFVDVAIFRAIKAVHHVMGKPELIYPSNCKILYTEIIGGLRIAIMKDASNACCKV
DTKIDGSQATGVDKNNLVERNLLKGITADENTAAHDVATLGVVNVRYCGYIAVVKVQERE
NKKVGPLFQSIELEQPEGGANALNINSLRLLIHETTTLEDNKPAPNLQNLEREELNASQM
FVERLLEESIAKLEEEKPEREHFVRWELGACWIQHLQDQKNAEKDKKLSKEKAKKLSNEK
AKSEMKVEGLGTPLKSLKNNRKKSEGSNHKIHSETLKSQADGVNGESEKATSASIEARLE
SRDKENELALKNLLSDEAFARLKESETGLHCKSLEELIDLSHNYYVEVALPKLVTDFGSL
ELSPVDGRTLTDFMHTRGLQMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHIIQAVISA
VGNTQRMAVSIAAALNLMLGVHESDGLNKSHNVHPLVWRWLELFLMKRYEWDLNGLNFKD
VRKFAILRGLCHKVGIELVSRDFDMDSPSPFRKIDVVSLVPVHKQAACSSADGRQLLESS
KTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQK
ALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAA
TYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLS
VQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHL
SVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGNFYQDNNLTSPDGSSKEVLRESSDEE
THAPEPESDTDVNQGSSIPFQQQELVVEESAVEKPNITEEISSAIHEEGDDGWQPVQRLR
SAGSYGRRLKQRRATIGKVHSYQKRNADAVIDYSSAKSSHHSSRYYLLKKRAVSHGSSAD
HHPVTTFHGTKFGRRVVKAVAYRVKSMPSSAKTGTVEASINGSEPSSSPSESRPASAPND
TSSVKNSIISLGKSPSYKEVAVAPPGTIAMLQVRVPQSDNPDNQEFSFGKPEDGTMEEKE
NVNTNVTGAEKTNEEKSDSVLDATDNLKEETGVHPNREETHISDGLEDNPSVVVSESERG
VGSVVDIHKVVQDGILINGIPNSIDSPTSEFYEKDSSESIESHDNTKSTLQVVDDLKEKP
SVFNPGDTRGLPNRKLSASAVPFNPSPAVARASAVAINMTLPPGPGAVTAVAPWPVNMTL
HPRPATVLPTVNPMCSSPHQPYPSPPSTPNMMQPLPFMYPPYTQPQGVPTSTFPVTTSAF
HHNHFSWQCNGNSNVPEFIPGPFLPGYHPMEFSVPPPVVEPILDPIMQPKAQSGDLDSSC
SASILPENIDAVGDAEKEVDLLASKSMDNANEVAGIGRETVRGEFVKENGHLNLCGTENA
GSEPVHFTSQNQSLRRNVEREIEGEKTFSILVRGRRNRKQTLRIPISLLSRPYGSQSFKV
IYNRVIRGSEAPKSFSFSSTGDSTATAV
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atggctccaaggaacagtcgcggcaaggccaaaaacgagaagaagaagaaagaagagaag
gttcttccggttgttctggacatcaccgtaaaccttcccgatgatactcgagttatttta
aagggaatatcaacggacaggattatagatgttcgtcggctgctctctgtgaacacagaa
acttgctctatcaccaatttttcattatctcacgagataaggggcccgcggttaaaagat
gcggtcgacgtggcagcactgaagccctgcgttctttcgctaacggaagaggacttcgat
gaagagggggcagcggcgcacgtcaggcgcgtcctggacattgtggcgtgtacgacgagc
ttcggcccttgcggattcgacgccggaaagaatgtgcctgatagtaagagcgccaagaaa
actaccgccaaaaatgaaaaagacaagcaatcgcaaccaccgtcttcaccgcaatccaag
aattcaaaatcatcgaatgacgtgacggttgatggagatggagagatgagccacgctttc
cctaagctcagcagtttctatgagttcttctcactttctcatctcactccccctcttcaa
tttataaggaaggcaccgaagcgacgggttgaagaaatttcccctgatgatcatctttta
tcccttgatgtgaagctttgtaatggaaagatggttaatgttgaagcttgcaggaagggg
ttttatagtgtaggaaagcagcggatcctctgtcacaacattgttgatttgttggggcag
cttagccgagcttttgacaatgcatacaatgagctcatgaacgcattctcagaacgtaat
aagtttgggaatcttccttatggcttcagagcgaacacatggctcatccctcccatcgca
gcacagtcaccatcagttttccctcctcttcctgcagaagatgaagcatggggaggaaat
ggaggtggtctaggaagagatgggaaaagtgatttgattccttgggccaatgagttcttg
tttgttgcatctatgccttgcaagacagcagaggaaaggcagattcgagacaggaaagca
ttccttcttcacaacttatttgttgatgttgccattttcagagccatcaaagctgtgcac
catgtgatgggaaaacccgagctaatctatccaagtaactgtaaaatactctatactgag
ataatagggggtttgaggatcgccatcatgaaagatgcttccaatgcatgctgcaaagtg
gatactaaaattgatggaagtcaagcaactggagtggataaaaataatttagtcgaaaga
aacctactgaaagggattactgctgatgaaaataccgctgcccatgatgttgccaccctt
ggtgttgtcaatgtaagatattgtggctacatagctgttgtgaaggttcaggagagagag
aacaagaaagttggtcctctgtttcaaagcattgaacttgaacagcctgaaggcggtgct
aatgcactaaatattaacagtttgagattacttattcatgagacaacaactttagaagac
aataaacctgcaccaaatttgcaaaatttggaacgcgaagagcttaatgcttcccaaatg
tttgtggagagactgctggaagaaagcattgccaagcttgaggaagagaaaccagaaagg
gaacattttgtgagatgggaacttggagcctgctggatacagcatttacaggaccaaaag
aatgctgagaaagataagaaactatcaaaagagaaagctaagaaactatcaaacgagaag
gctaagagtgaaatgaaggttgaggggctcggaacacctcttaagtcccttaagaataac
aggaaaaaatcagaaggaagtaatcacaaaatacattctgaaactttaaaatctcaagca
gatggagttaatggagaatctgaaaaagctacttcagcttctatagaagctaggcttgaa
agcagggataaagaaaatgagcttgcactaaagaatttgttgtctgacgaggcatttgca
cggctaaaagaatctgaaactggacttcattgtaagtccttggaggaattaattgacttg
tctcacaactattatgttgaagtcgcactcccaaaactggtaacagattttggttctctg
gaactttcaccagttgatggccgaacccttactgatttcatgcatactagaggccttcag
atgcgttctctgggacatgtggtcaagctatcggaaaagctgtcacacgtacaatcactc
tgtattcatgagatgatagttcgggcatttaagcacattattcaggcagtgatctctgct
gtcggtaacactcagagaatggctgtctcaatagctgctgcactgaatctgatgcttgga
gtgcatgaaagtgatggattaaataagtctcataatgtccatccccttgtgtggagatgg
ctggagttgttcttgatgaagcgatatgagtgggatcttaatggcttaaacttcaaagat
gtgcggaaatttgcaattctacgggggttgtgtcacaaggtgggtattgagttggtttca
agggattttgacatggattctccaagtccattccgaaaaatagatgttgtcagcctggtg
cctgtgcataagcaagcggcatgctcatctgccgatggaagacagctcctggaatcatca
aaaacagctttagataagggaaaacttgaagatgcagtcacctatgggaccaaggccctt
gctaagctggtagcagtttgtggtccctaccatcgaatgactgcaggtgcttacagcctc
cttgctgtagtattgtatcacactggagacttcaatcaggctacgatttatcagcagaaa
gccttggatatcaatgagcgagaactaggacttgatcatccggatacaatgaagagttat
ggggatcttgctgtattctattataggcttcagcacacagagctagctctcaagtatgta
aagcgagctctgtatcttttacatctgacttgtggcccatctcatccaaacactgctgca
acatacatcaatgtggctatgatggaggaaggacttgggaatgtacatgttgccctcaga
tatctccacaaagccctgaagtgtaaccaaaggttactcggtccagatcatattcagaca
gcagcaagttaccatgccatagcaattgcactctcattgatggaggcttaccctttgagt
gttcagcatgaacaaacaaccttgcagattcttcgagcaaagttgggcccagatgatctg
cgtacacaggatgctgccgcttggcttgagtactttgagtccaaggcttttgaacagcaa
gaagctgcacgaaatggtactaggaagcctgatgcttccatagccagcaaaggccatctg
agtgtatcggatttacttgactacattaatccaagtcatgataccaaggggagaaatgtc
tcaacattgaagagaaagacctatgttgcaaaggtgaagggaaacttctaccaagacaac
aatttaacaagtcctgatggatcttccaaggaagttctgagagaaagttcagatgaagag
acacatgcacctgaaccagaaagtgacacagatgtcaatcaggggagctctataccattt
cagcagcaggagcttgttgtagaagagtctgcagtagaaaaaccaaacatcacggaagaa
atttcatctgcaatacacgaggaaggagatgatggatggcaaccagttcaaaggctgaga
tcagctggttcatatgggcggcggctaaaacagcggcgggcaacaattggcaaggttcat
agctatcagaaaaggaatgcggatgcagttattgactactcttcagccaagagtagtcat
cacagtagtaggtattacctcttaaagaaaagggcagtatctcatggaagttctgcagat
caccaccctgtgactaccttccatggtaccaaatttgggaggagagtagtcaaggctgta
gcatacagggtaaagtccatgccttcttctgctaaaactggaacagtagaagcttctata
aatgggagtgagccttcaagttctccttcagaatcccgtcctgcttctgcaccaaatgat
accagctcagtgaagaactcaataatcagtcttggaaaatctccttcttacaaggaagta
gcagttgcccctcctggtactattgcgatgttgcaagtcagggttccacaaagtgataat
ccagataatcaggaatttagttttggaaaacctgaagatggaacgatggaagaaaaagaa
aatgttaacaccaatgtgactggggcagaaaaaacaaatgaagagaagagtgattctgta
ttggatgcgacagataacttaaaagaggaaactggggttcatccgaacagggaagaaact
catatatctgatggattggaagataacccatctgtggtggtatctgagagtgagcgagga
gttggatctgttgttgacatacataaagtggttcaggatggcatattgattaatggtata
cccaactcaattgattctccaacaagtgaattttatgagaaggattcatctgaaagtatt
gaatcccatgataacacaaagtcgacactacaagtagtggatgatttgaaggaaaaacca
tcagttttcaatccaggtgacactcggggattacctaataggaagttgtctgcatctgca
gtaccattcaacccatcaccagctgttgcacgtgcttcagcagttgccattaatatgact
ttgcctcctggtcctggtgcagttacagctgttgcaccttggcctgtaaacatgactctt
catccaaggcctgctactgtcttacctacagttaatccaatgtgctcatctccacaccag
ccatacccctcacctccttcaactcccaacatgatgcagccattgccgtttatgtatcct
ccctacactcaaccccaaggagtaccaaccagtacatttcctgtgactaccagtgccttt
catcacaatcatttctcatggcaatgcaatgggaactccaatgtaccagagttcattccc
gggccctttttgcctggctaccatccaatggagttttctgttccaccacctgttgttgag
ccaattctggatcccataatgcagccgaaagcacagtctggcgaccttgatagttcatgt
tcagcatcgattctgccagagaacattgatgctgtgggagatgctgagaaagaagtggac
cttctagcatctaaatcaatggataatgcaaatgaagtagctggaatcggtcgggaaact
gttaggggggagtttgttaaggaaaatggtcatttaaatttgtgtgggactgaaaatgca
gggagtgaacccgttcactttaccagccagaaccaaagcttgagaagaaatgttgaaagg
gaaattgaaggtgagaaaaccttcagcatcttggtaagaggaagaagaaaccgaaagcag
actttgagaataccaattagtcttctcagtcggccatatggctcacagtccttcaaagtt
atatataaccgggtaatcagaggaagtgaagctccaaagtctttcagcttttcttcaact
ggagattctacagctactgctgtataa
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