Citrus x clementina (clementine): CICLE_v10018465mg
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Entry
CICLE_v10018465mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11797
PH-interacting protein
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10018465mg
Ubiquitin system [BR:
cic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
CICLE_v10018465mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_EML
WDR55
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF4
Bromodomain
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
VPS8_N
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
18047465
NCBI-ProteinID:
XP_006444488
UniProt:
V4VWN6
LinkDB
All DBs
Position
Unknown
AA seq
1727 aa
AA seq
DB search
MDYWKLSSSSGAPSLGKAPLKFSSTVQEMAQLEQQDMVANQVVEADVDLREVYFLIIHFL
SSGPCQRTLGLLWNELLEHQLLPRRYHAWFSRSGVNSGNDNDDGISFPLSYNKLVERYPH
IEWDHLVKLLRQLLLYKASPFHGRIGGIAPNAADVPTLLGSGSFSLLECDRSMKYKQVKP
LPAYLRWPHMQADQVHGLSLREIGGGFKKHHRAPSVCSACYAIAKPSTMVQKMQNIKKLR
GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV
ASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR
YSQYSPRIYLPKPPDAITGKSNVPSNNGPSSSNGLQSHQILCCAYNANGTVFVTGSSDTF
ARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVASRSAMSDAFKEENVPKFK
NSWFCHDNIVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHLKVPPPPLPPQPPRGGPRQR
LLPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNP
RIAMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTG
QGESQKDAKYDQFFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQDPLCDSSMIPYEEPYQ
SMYQQRRLGALGIEWRPSSIKLAIGLDFSLGQDYAMPPLEDLERMMEPVPEFIDPVYWEP
ENEVISDDNDSEYNIAEECASEAEQGSFCSTSSTDCSAGDSEVEHSRKDGRRRSTRRKHR
AEVELKTSSGRRVRKRNLDERDGSASGSNRTKKSKNSQKALKKKSSKAKLLRPQRVAARN
ARSMFSRITGTSTGEDDSDSEYNSSNSDTVLQDSHVQSKEDDRNLQNMQQQHKREEEQTI
VESEFMGKPLELLESQSDTGNRKRLVLKLSLRDHKKALSLEDTRVKGNDMAKLPQSSSGP
PQGTTERKIDLSLKEPGSSSAGSGIDVGLSQKHNRIVFADGSQDEKYDSQLEESAGDMEN
KTRWAEVKIRTSKRSSSSGVLLPPDANFDVHNDSIGDVNRCVKLENGHGKFSSNSETSCY
GCVRSCSDKEKFGSDALLDLASVRKEELARHEDIKKSSSFNSTPLVDHQQNDDVHKSRNE
DVGTNYRDELKENPPLRVRIRTKGILRDTKSPSEQKSSTSVKDLPSAESDPIPMSESSLC
MEGNLMSEVPEEGEGYGRSSSDQLLNSKLKFKVRDGSKSSYKTRTDIEAFDGGMEDGINH
EASGIDSPEAASGSIRKTRSMKMKIISREPIAANCNFKSKNGHDLVGTSKTVGNSSMEAH
DEFFPEEWIPTSTVKSRPRSTRNRRGDHDGHPCLLSGRKSNFPVRKLSWLMLSEHEEGYR
YIPQLGDEVIYSRQGHQEFIESTGSQEVGPWWSINGYISAVETCKVENLVYATFPGSGDS
CCKITLKFVDPSSSVLGKAFKLTLPELRDFPDFVVEKTLYDAAISRNWTHRDKCQIWWRN
ANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEMHDPNVMWEHPEI
DSESRDKLLSSFNKLEQSVSRKQDYYGIQRLNEAAQKLDYLNRFPVPLYPEVIRLRLVNN
YYRSLEAAKDDINVMLSNAESYFIKNAALSAKVERLRDWFNRTLNKL
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atggactattggaagctttcatcttccagtggtgcaccttctcttggtaaagcacctttg
aaattttcgagtacggtgcaggagatggctcagttagagcaacaagatatggtagccaat
caagttgttgaggctgatgttgacttaagagaagtttactttctgatcatccatttttta
tcttctgggccatgtcaaaggactctcggactgctttggaatgagcttttggaacatcag
cttctacctagaagatatcatgcttggttttctaggagtggtgtaaatagtgggaatgac
aatgatgatggcatctcttttccattaagttataataaattagtggagaggtatcctcac
attgaatgggatcacttagtaaagcttctgaggcaacttttgctatataaagcctctccc
ttccatggcaggattggtggaattgccccaaatgctgctgatgttcctacgttacttgga
tctggctccttttcacttctggaatgtgatagaagtatgaaatataagcaagttaaacct
ctaccagcttacctgcgttggccccacatgcaggctgatcaggttcatgggttaagttta
agggaaattggtggaggtttcaaaaagcaccatcgtgctccatctgtttgctctgcatgt
tatgcaattgctaaaccatcaaccatggtgcaaaaaatgcaaaatataaagaagctaagg
ggtcaccgtgatgctgtctattgtgccatatttgatcgctcaggaagatttgttattact
ggttcggatgaccgccttgttaaaatctggtcgatggaaactgcattttgcttggccagt
tgtcgtggacatgaaggggacataacagacttggctgtaagttcgaataatactttggtg
gcatcagcttcaaatgatttcgtcattcgagtttggcgcttgccggatgggttgccgatt
tcagttttgcggggacatacaggagctgttactgccattgcattcagtccgaggcctagc
gctatttatcagcttttatcgtcctcagatgatggaacttgtcgaatctgggatgctcga
tattcccaatatagtccacgaatatacctgcccaagcctccagatgctatcactggtaag
agcaatgttccatccaataatggaccctcatctagtaatggtctacagagccatcagata
ttatgttgtgcttacaatgccaatggaactgtttttgtcactggtagctctgacactttt
gcaagggtctggagtgcctgtaaatctagcgtggaagactctgaacaaccaattcatgag
ctggatgtgttatcggggcatgaaaatgacgtcaattacgtccaatttagtggctgtgct
gtcgcttcaagatctgcaatgtctgatgctttcaaggaggaaaatgttccaaaatttaaa
aactcctggttctgtcatgacaacattgttacctgttcacgggatggtagtgcaattata
tggataccaagatcacgtagatcccatggaaaagttggacgttggacgcgtgcatatcat
ttgaaagttccacctcctccactgcctcctcaacctcctcgaggaggccctcgtcaaagg
ctcctcccaactcctcgtggagttaacatgattgtgtggagcctggataatcgctttgtg
cttgctgctatcatggattgcagaatttgcgtttggaatgctgttgatggcagcttggta
cattctttgactggtcattctgcatcttcctatgttctggatgttcatcctttcaaccct
agaattgctatgagtgctgggtatgatggacgaactatagtctgggatatatgggagggc
acgcctattcggatatatgaaataggacgtttcaagttggttgatggaaagttttcaccg
gatgggacatcaattgttctttcggatgatgttggccagatatatttgctaaacacaggt
cagggtgagtctcaaaaagatgccaagtatgatcagttcttccttggggattatcgaccc
cttatccgggatagtcttggaaatgttcttgaccaggagacacaacttgttccacataga
aggaacattcaagatcctctttgtgattcaagtatgattccatatgaagaaccttaccag
agtatgtaccagcaacgtcggcttggtgcactgggcattgagtggcgcccttcatccatt
aaactggctattggactagattttagtctaggccaggattatgcaatgcctcccttggaa
gatttggagagaatgatggagccagtacctgagttcatagatcctgtgtactgggagccg
gaaaatgaagtcataagtgatgacaatgattcagagtacaatattgctgaggaatgtgcc
agtgaagctgagcaaggaagtttttgttccacttcttccactgattgtagtgcaggagac
agtgaggtagaacatagtcgtaaagatggacgtcgcagatcgacaagaagaaaacacagg
gctgaagttgagttgaagacttcatctgggaggcgtgtcaggaagaggaatttggatgag
cgtgatggatctgcttctggcagtaacagaactaagaaatcaaaaaatagccaaaaagct
ttaaagaagaagtcctccaaagcaaaattattgagacctcagcgagttgctgcacgcaat
gctcgaagtatgttctctagaattacaggaacttcaacaggtgaagatgactcagattca
gagtacaattcgtcaaacagtgatacggtgctgcaagattcacatgttcaaagcaaagaa
gatgacagaaacttgcagaacatgcagcagcaacataaaagagaagaagaacagacaata
gtggagtctgagtttatgggcaagcctcttgagctcctagaatctcagtcagatacagga
aacaggaagagattggtcttaaaactttccttacgtgaccacaagaaggctctatctttg
gaagacaccagagtaaaaggcaatgatatggctaagttaccgcaatcatcttctggacct
cctcaaggaactactgaaagaaaaattgatttaagcttgaaagagccggggtcatcttct
gcaggcagtgggattgatgtggggttgtctcaaaagcataacagaattgtttttgcagat
ggaagtcaagatgagaaatatgacagtcaactggaggaatctgcaggtgacatggagaac
aaaactagatgggcagaggtcaagatccggacatccaagcgttcatcaagttcaggagta
ttgctgccacctgatgcaaattttgatgtccataacgacagcataggcgatgtcaacagg
tgtgttaaacttgaaaatggacatgggaaattttcatctaattcagaaacttcgtgctat
ggatgtgtgcggtcttgcagtgataaggaaaagtttggaagtgatgcactactggacctg
gctagtgtgagaaaggaagagcttgctcgtcatgaggatataaagaaatcttcatcattc
aattcaacacccttggttgaccaccagcagaatgatgatgttcataaatctcgtaatgaa
gatgttggcacaaattaccgtgatgaacttaaagagaatccacccctcagggtaagaata
agaacaaaaggcattttgagggatactaaaagtccttcagaacagaaatccagtacttca
gttaaggacctgccaagtgctgaaagtgatccgattccgatgtccgaaagctccttgtgc
atggagggcaatctaatgtctgaagtacccgaagaaggtgaggggtatggcagatctagt
tctgaccagttattaaattcaaagttaaagtttaaagtgcgtgatggcagtaaaagttct
tataagactaggactgatatagaagcctttgatggtggcatggaagatggcatcaaccat
gaagcttcaggaattgattcccctgaagcagcttctggttcaatacgtaaaacaagatcc
atgaagatgaaaataatttctcgggagcccattgctgctaactgtaacttcaagtctaaa
aatggccatgatttggtggggacatcaaaaactgttggaaactcctccatggaagcacat
gatgagttctttcctgaagaatggataccaacttcaactgtcaaatcacgacctaggtca
actagaaaccggcgaggagatcatgatggacatccatgtctcttgtctggaaggaagtca
aatttccctgttagaaaattgtcgtggttgatgttgtcagagcacgaggagggttaccgt
tacatccctcagctgggtgatgaagttatatattcgagacagggccatcaagaattcatt
gaatcaactggctcgcaagaagtgggtccatggtggtcaattaatggatacattagtgcg
gttgaaacttgcaaggttgaaaatcttgtctatgctacatttccaggttctggggatagc
tgctgtaaaatcacccttaaatttgtagatccttcatcgagtgtgcttggtaaagcattc
aagttgaccctgcccgaacttagagattttcctgattttgttgttgaaaaaacactgtat
gatgctgctatcagcagaaattggacacacagggataaatgccagatttggtggaggaat
gcgaatggggaaggtggcacttggtggaaaggtagaattactaaatcacaggccaaatct
gaggagtttcccaatagcccctgggacaggtatatggttgaatacaagactggggattcc
cacctgcatagtccttgggaaatgcatgaccccaatgttatgtgggagcatcccgaaatt
gattctgagagcagagataagttgctgtcttcttttaataaattggagcagtcagtgagc
agaaaacaggattattatgggattcaaagattgaatgaagctgctcaaaagctggattac
ttgaacagatttccagttcccttgtatcctgaagtgatccggttgagattagtgaacaac
tactataggagcttggaagcagcgaaggatgacataaatgtgatgctgtcgaatgccgaa
tcttattttataaaaaatgctgccttatcagctaaggtggagcgcctaagggactggttt
aacaggacactgaacaaattgtag
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integrated database retrieval system