Citrus x clementina (clementine): CICLE_v10018483mg
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Entry
CICLE_v10018483mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10018483mg
Enzymes [BR:
cic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CICLE_v10018483mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CICLE_v10018483mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
DEAD
Helicase_C
ResIII
Cas3-like_C_2
TBSV_P22
T2SSE
Motif
Other DBs
NCBI-GeneID:
18049027
NCBI-ProteinID:
XP_006440737
UniProt:
V4TKP0
LinkDB
All DBs
Position
Unknown
AA seq
1505 aa
AA seq
DB search
MIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNELL
SEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQLSLIK
KDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPA
HTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDRSGEGIIITSHDKLAYYLRLL
TSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIGWDEV
IADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNE
MLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKHGKISIL
IQACILLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCKAV
DRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVKQY
LGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHIYHSE
LFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQART
SHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTI
SAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMA
LLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYIS
SQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQASGSGYPGKF
YCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPE
EDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQASLNYFSCVLVC
TSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILV
HEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAI
NPAYYGLEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDTVEPTMLGTIASQYYLSYV
TVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDP
HVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLL
QMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSRL
HQDLQRFPRIQVKLRLQRRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAWWL
VLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFEQEHSIEALV
EQLVI
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgatacgtattgtgggcctgtcagccactttaccaaattatttggaggttgcgcagttt
ttgagagtgaatccagagatgggcctcttcttctttgattctagttatcgtcccattcca
cttgcacaacagtatattggaattagtgagccgaattttgcagctcgaaatgaattattg
agtgaaatatgctataagaaggttgttgattcattaaggcaaggtcatcaagctatggta
tttgttcattcacggaaggatactgtaaaaacagctcagaaactggttgatcttgctcga
agatatgaagatctcgaggtctttaacaatgatacacatccccagctttccttaatcaag
aaggacgttatgaagtccagaaataaagatcttattgaactttttggacttgctgttggt
gttcatcacgctgggatgttacgttctgatagaggtctgactgagcgtcttttttcggaa
ggactcttgaaggtgcttgtctgcactgccacattggcatggggtgttaatctgcctgct
catactgttgtcattaaggggacccaattatacgatccaaaggctggtgggtggcgagac
ctgggaatgcttgatgttatgcagatctttggaagggctgggagacctcagtttgacaga
agtggtgaaggcatcataatcacctctcatgataaattggcttactatctccggttgctg
acaagtcaactgccaatagaaagtcagtttattagttccttgaaagataatctaaatgct
gaggtggcattgggtactgtgaccaatgtcaaggaagcttgtgcatggcttggttatacc
tatctttctatccggatgaaattaaatcctttggcatatggtataggatgggacgaggta
attgcagatccgtctttaagtttaaagcaaagagctcttgtaaccgatgctgcgcgtgca
cttgacaaagctaaaatgatgcggtttgatgagaaaagtggcaacttttactgtacagag
cttggtcgcattgccagccatttttatattcaatattctagtgttgaaacatacaatgaa
atgttgagacgccacatgaatgacagtgaggtaattgaaatggtttcccactcttctgag
tttgaaaatattgttgttcgagatgaggagcagaatgagttggagacattagtacagaca
ttatgcccagtagaagttaaaggtggtccttcaaacaaacatgggaaaatctcaattctt
attcaggcatgtattcttttgtacatatcacgtgggtggatagatacattctcattagtc
tctgatgctgcttatattagtgcaagtttggctcgtattatgcgggctttatttgagact
tgtttgcgtagagggtggtgtgagatgtctttgttcatgttggaatattgcaaggctgtg
gatcgccaaatctggcctcatcaacatccactcagacaatttgataaggagctcccggca
gaaatattgaggaaacttgaagaacggggggctgacctagatcgcctgcaagagatggag
gaaaaagacattggggcgctgattcgttatactcctgggggaaggttggtgaaacaatat
ttaggatatttcccttcaatccagttgtctgctactgtgagtccaatcaccagaactgtt
ttaaagattggtttggcaataactccagagttcacatggaaagatcattttcatggtgct
gcgcagcgttggtggattattgttcaggattctgagagtgaccacatttatcactcagag
ctttttacattgacaaagcgaatggctagaggggaaacacagaagctttccttcactgtg
ccaattttcgaaccacatcctccgcaatattacatccgtgctgtgtctgattcttggttg
catgccgaggcattctactgtatatcttttcataatctggctttacctcaggctcgtact
tcacacacagagctcttagatctaaaacctcttcctgtgacagcacttggaaacaatatt
tatgaagccttgtacaatttttcacattttaatccgatacaaacacagatctttcatatc
ctgtatcacacagacaataatgttctcctaggagcacccactggaagtgggaaaacaata
tctgctgagcttgctatgctccatctcttcaatactcaatctgacatgaaggttgtttat
atagcaccattgaaggcaattgttcgggagagaatgaatgattggaaagatcgtcttgtg
tctcagcttgggaaagagatggttgaaatgactggagattatactcctgatttgatggcc
ctattgtcagcagatatcattatatctactcctgagaagtgggatggtataagtcgtaat
tggcacagtcgaaattatgtcaaaaaggttggacttatgattttggatgagattcactta
ctgggtgctgaacgaggacccatcctcgaggttattgtatcaaggatgagatacatatca
tcacaaacagagcgtgcagtacggttcattggtctttcgacagctctggcaaatgcgggt
gatttggctgattggctgggtgttggagaaattggactcttcaatttcaaaccaagcgtg
aggcctgtacctcttgaagttcatattcaggcaagtggatccggatatcctggaaagttc
tactgcccaagaatgaatagcatgaataaaccagcatatgctgcaatatgcacccattca
ccgaccaaaccagttcttatatttgtttcatctcgtcgccaaacaaggcttaccgcattg
gaccttatccaatttgcagcttcagatgaaactccaaggcagtttctgggtatgccagaa
gaagatctacaaatggttctttctcaggtcactgatcagaacctgcggcaaaccttacag
tttggtattgggttacaccatgctggactgaatgacaaagacagatctcttgttgaagaa
ctttttgcaaacaacaagattcaggcatctcttaattacttcagttgtgtgttggtttgt
actagcacattggcatggggagtaaatcttcctgctcatttggttattattaagggaaca
gaatattacgatggaaaaacaaagagatatgttgattttcccatcactgatatcttgcaa
atgatgggtcgtgctggccgcccacaatatgatcagcatgggaaagcagtaattcttgtt
catgaaccaaagaagagcttctacaaaaagtttctgtatgaaccatttccagttgagagt
agtctgagggaccagttgcatgatcacttcaatgcagagatagtgtctggaacaattttt
cataaggaagatgcagtgcattatctttcatggacttacttgttccgtagactggccatt
aatccagcctactatggattagaggatacagaagctgaaggcctgagttcatatttgtct
aggttagtgcagaatacatttgaagatctggaagatagtggatgcgtcaagatgactgaa
gacactgtggagccaacaatgctgggcacaatagcatctcagtattacctcagctatgtg
actgtatcaatgtttggatctaatataggaccagatacatctctagaggtgttcttgcat
attctttctggtgcttctgaatatgatgagcttcctgtgcggcataatgaggataatcac
aatgaagcattgtcccagagagttcgatttgcggtagacaataatcgcctggatgatcca
catgtcaaagcaaatctgctatttcaggcacatttctctcggttagatttacctatcagc
gactatgtcactgacttgaagtcggtgttggatcaaagtatacgcatcatccaggccatg
atagatatatgtgctaacagcgggtggctttcaagttcaatcacttgcatgcatcttttg
caaatggttatgcagggcctatggtttgaacaagattctgcgttgtggatgtttccatgc
atgaacaatgatcttttaggtacgctaagagcaagaggaatttccactgtgcagcaactc
ttggatattccaaaggaaaatttgcaaacggtgattggaaatttccctgtttcaagatta
catcaggatctgcaacgtttcccaagaattcaagtcaaattaagacttcagagaagggat
attgatggtgaaaattcactaactctaaacatcagaatggataagatgaattcatggaag
aacacatccagggcttttgctcttcggttcccgaagataaaagatgaagcttggtggttg
gttcttggtaacaccaacacctcagaattatatgctttgaagagaatttctttctctgat
cgcttaaatacccacatggagttgccatcaggcataaccacttttcaggggatgaaactg
gttgtagtttcagattgttatcttggttttgagcaagaacattccattgaagcccttgtt
gaacaattagtaatataa
DBGET
integrated database retrieval system
