Citrus x clementina (clementine): CICLE_v10018514mg
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Entry
CICLE_v10018514mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CICLE_v10018514mg
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cic01002
]
CICLE_v10018514mg
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10018514mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10018514mg
Peptidases and inhibitors [BR:
cic01002
]
Metallo peptidases
Family M1
CICLE_v10018514mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CICLE_v10018514mg
Coactivators
SAGA/TFTC/STAGA complex
CICLE_v10018514mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
CICLE_v10018514mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
18048876
NCBI-ProteinID:
XP_006440912
UniProt:
V4TLA7
LinkDB
All DBs
Position
Unknown
AA seq
1354 aa
AA seq
DB search
MAKPRKPKNEETKVENSGAVVRHQKLCLSIDMEKHQIYGYTELEIAVPDIGIVGLHAENL
GIESVLVDGEPTEFEYYPHNHQNVENEKRWRSMVSSPSSAADAAAAVYISALERELVPNL
LINCCKPFKGLTDQIEQMNLENKLDSSAEPKQNVKLVRIDYWVEKVEAGIHFDGNALHTD
NQIRRARCWFPCIDDSTQRCCYDLEFTVSQNLIAVSAGSLLYQVLSKDDPPRKTYVYRLD
VPVSAKWITLAVAPFEVLPDHHQSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKF
PFGSYKQVFLAPEMAVSSSTFGAAMGIFSSQILYDEKVIDQAIDTSIKLSFALARQWFGV
YITPELSNDEWLLDGLAGFLTDSFIKKFLGNNEARYRRYKANCAVCKADDSGATALSSSA
SCKDLYGTQCIGIFGKIRSCKSVAILQMLEKQMGSNFFRKILQNIISRAQGASPVRTLST
KEFRHFANKVGNLERPFLKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPD
SRTPVLSSNTDSENRDGDIGWPGMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSKLA
ARRALKPKKGSKPDGCDDNGDAVAGLDMRSSMESPLSWIRADPEMEYLAEIHFNQPVQMW
INQLEKDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTAS
EETDWAGLLHLVKFYKSRRFDENIGLPRPNDFHDFSEYFVLEAIPHAVAMVRAADNKSPR
EAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILFLSSLLKRIDRLLQFD
RLMPSYNGILTISCIRTLTQIALKLSGFISLDQVVKLIKPFRDFNTIWQVRVEASRALLD
LEFHCNGIDSALSLFIKSVEEEPSLRGQVKLGIHAMRICQIKGGSDSNHEVDTVTLVALL
NLLESRISFNNVFLRHHLFGILQILAGRAPTLYGVPRDKLLLLGDGETSEQKNVFASFVT
EMRRAEPPMDVPNLSQDNLAVRDASKEVDCVANGHAENILAVPEASKDADVISNSHERKM
AVPEASKEAETVSNSYERKLPVVKIRVKQSTATSRADEADNRTIEKSQGGNHENDRGASS
SVSVDAPQRNSAEAVSFSNHNIEEVNSCHDHGSRMTASIGSAKLPSEGDNFGKELQCTAD
SSKVSMHLQPDDPSSPSIMQDNNVDADAQKFASLQTLSVARHDLNGKEKKEKKDREKKRN
REDPDYLEKKRLKKEKKRKEKELAKLLGDEAKAPSVELAAKKEESNIKNATAQLKPFEPS
GSKVTISKVAAKPEPSEGSPAPKFRIKIKSRTQN
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcctcgtaagccgaagaacgaggaaacgaaggttgagaattccggcgccgtc
gtgcgtcaccagaagctctgcctctcaatcgacatggagaagcaccaaatctacggctac
accgagctggagattgcagtaccggatatagggattgtagggttacatgcggagaatttg
ggaattgagagcgtgttggttgacggagagcctactgagttcgaatattatccgcataat
catcaaaatgtggaaaatgaaaagagatggagatccatggtctcgtcgccgagttctgct
gcagatgctgcagctgctgtgtacatatcggctctggaaagagaattagttcctaatttg
ctcatcaattgttgcaagccgttcaagggtttaactgatcagatagaacaaatgaatttg
gagaataagttggattcctctgctgaacctaagcagaatgtgaaattggttcgtattgac
tattgggtcgagaaagtagaggctggaattcattttgatggtaatgcattacacactgat
aatcagataaggcgagcacggtgctggtttccttgtatagatgacagcacccaacgatgc
tgttatgatctggagtttacagtctcccaaaatcttattgccgtcagtgctggaagctta
ctatatcaggttctgagcaaggatgatcctcctcgcaaaacatacgtctacagattagat
gttccagttagtgctaagtggataactttggcagttgcaccctttgaagtccttcctgac
caccatcagagtctcatgtcacacatatgtttgccagctaatgtatcaaagattcataat
actgtggagtttttccacaatgcgttcagccattatgagacataccttgatgcaaaattt
ccatttggatcatacaagcaagtttttttagctcctgagatggcagtatcatcgtccact
tttggagctgcgatgggcatctttagctctcagattctgtatgatgagaaagttatcgat
caggccatagacactagcattaaactttcatttgcccttgcaagacagtggtttggagta
tatatcactcctgagttatcgaatgatgagtggctgctggatggtcttgctggttttcta
acagattcatttatcaagaaatttttgggaaataatgaagctcgttatcggagatacaag
gcaaattgtgctgtttgcaaagcagatgacagcggtgcaacagctttaagctcttctgct
tcttgtaaggatttgtatggaacacaatgtatcggtatatttggcaagattcggtcatgc
aagtctgtggcaatccttcagatgttggaaaagcaaatggggtccaatttcttccgaaaa
attttgcagaatatcatttctcgggctcagggtgcatctcctgtgagaactcttagtaca
aaggagtttcggcattttgcaaataaggttgggaaccttgagcgtccattcctcaaggag
ttttttccccgttgggttggaacgtgtggctgcccggtgctaaggatggggttttcatat
aacaaacggaaaaatattgttgaactggcggtgttgcgggattgcaccgttaaacctgac
tcaaggactcctgttcttagttctaataccgattctgaaaaccgagatggtgatattgga
tggcctgggatgatgagcattagagttcatgagcttgatggtatgtatgaccatccaatt
ctgccaatggctggagatgcatggcagctactggaaatacaatgccattcaaagctggct
gcgagacgtgccttgaagcctaaaaagggttcaaaacctgacggctgtgatgataacggg
gatgctgttgccggtttagacatgcgctccagcatggaatctccattgtcatggattagg
gcagacccagaaatggaatatctggctgaaattcattttaaccagcctgtacagatgtgg
ataaatcagttagagaaggatggagatgttgttgctcaggcacaagcaatcgcagctcta
gaagctctgccccatctttctttcaatgttgttaacacactgaataatttcctcagtgac
tccaaggccttttggagagttcggattgaggcagcatatgctttggctaatacagcatct
gaggaaactgattgggctgggttgcttcatctagtgaaattttataaaagtcgaaggttt
gatgagaatattggactccccaggccaaatgatttccatgatttttcagagtattttgtt
cttgaggctattccacatgccgttgctatggttagagctgctgacaacaaaagcccaaga
gaagctgtcgagtttgttttacagcttttgaagtataatgataataatgggaatccctac
tcagacgtattctggcttgctgcgctggtccagtcagttggtgaacttgagtttgggcaa
cagagtattctctttttatcatctcttctcaagcgtattgatcgacttttgcagtttgac
aggctcatgccaagttacaatgggatcttgacaatcagctgcatccgaacgttgactcaa
attgcgttaaagctatctggattcatctctcttgatcaggttgttaaacttattaaacca
tttagggatttcaatactatatggcaagttcgagttgaggcgagcagagcactccttgat
cttgagttccactgcaatggcatagattcagcattgtcattgtttatcaaaagcgtagaa
gaagaaccgtcgttgagaggacaggtgaaattgggtattcatgctatgaggatatgtcag
ataaaaggtggatcggattccaatcatgaagttgatacagtaactctagtggctttgctg
aatttgcttgaaagtcgtatatcattcaataatgtattccttcgtcatcacttgtttggc
attttacaaatccttgcaggaagagcccccacgctttacggagtgcccagggataaattg
ttgcttctgggtgatggagaaactagcgagcagaagaatgtttttgcatcttttgttacg
gaaatgagacgtgcggaacctcctatggatgtcccaaacctttcacaggataatttggcc
gttcgagatgcttccaaggaggtagattgtgttgccaatggtcatgctgagaatatattg
gctgttccagaagcttcaaaggatgcagatgtcatttccaacagtcatgaacggaaaatg
gcagttccagaagcctcaaaggaagcagaaactgtttccaacagttatgaaaggaagctg
ccagttgttaagattagggttaaacaatctactgcaactagtagagcagacgaggctgat
aatagaaccattgaaaaatctcaaggtgggaatcatgaaaatgaccgtggcgccagtagt
tctgtttctgtcgatgcaccccaaaggaattcagcagaggcagtgagctttagtaatcac
aatatcgaagaagtcaattcatgtcatgatcatgggtcacggatgactgctagcattggc
agcgcaaaacttccaagtgaaggagataatttcgggaaggaactccagtgcactgctgat
tcaagcaaagtttctatgcacctgcaacctgatgacccatcgtcgcctagcatcatgcaa
gataacaatgtcgacgctgatgctcaaaaattcgcaagccttcaaaccctctctgttgca
agacatgatttgaacggcaaagaaaagaaggagaagaaagacagagaaaagaagcggaac
agggaagatccagattatttggagaagaagcgtctaaagaaggagaagaaacgaaaggag
aaagagttggcgaagctgctgggtgatgaggcaaaggcgccttcagtagagttggctgcc
aagaaagaggaatccaacattaagaatgcaaccgcacaattaaaaccatttgaacccagt
ggatcaaaagtaacgatctcgaaggtagcagccaagcctgagccatcagaaggcagtcct
gcccctaaattccgaattaaaattaaaagtagaactcagaattaa
DBGET
integrated database retrieval system
