Citrus x clementina (clementine): CICLE_v10018597mg
Help
Entry
CICLE_v10018597mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cic04131
]
CICLE_v10018597mg
Membrane trafficking [BR:
cic04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
CICLE_v10018597mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
ANAPC4_WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
18047320
NCBI-ProteinID:
XP_006444983
UniProt:
V4TD44
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MYMAYGWPQVIPLEQGLCPSSQQIIYFKVNNGLLLIASPCHIELWSSSQHKVRLGKYKRD
SESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEKSIQIGGKQPSGLFFIKISL
VLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVAA
LSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKK
GLKLAEFIKIDKELGSGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDW
GYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKP
NQDCKYEPLMSGTSMMQWDEYGYRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYARQVI
YGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLILYDI
RQKKWRVFGDITQEQKIQSKGLLWLGKIIVVCNYIDSSNTYELLFYPRYHLDQSSLLCRK
SLLAKPIVMDVYEDYILVTYRPFDVHIFHVKLFGELTPSTTPDLQLSTVRELSIMTAKSH
PAAMRFIPDQVPRECSLNNHVSTSSDMLAREPARCLILRANGELSLLDLDDGRERELTDS
VELFWVTCGQLEEKTSLIEEVSWLDYGYRGMQVWYPSPGVDPYKQEDFLQLDPELEFDRE
VYPLGLLPNAGVVVGVSQRMSFSACTEFPCFEPTPQAQTILHCLLRHLLQRDKIEEALRL
AQLSAEKPHFSHCLEWLLFTVFDAEISRQNINKNQISIPKRAASFSLLEKTCNFIRNFPE
YLNVVVSVARKTDGRHWADLFSAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQ
YSALRLLQATLDECLYELAGELVRFLLRSGREYEQASTDSDKLSPRFLGYFLFPSSYRRP
SLDKSTSFKEQSPNVASVKNILESHASYLMSGKELSKLVAFVKGTQFDLVEYLQREGRVC
ARLENFASGLELIGQKLQMGTLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRSEVLFDL
FRHDMRLWEAYAITLQSYPAFAEYHDLLEALDEKLSSVVDSAKR
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcatacggatggccgcaggtgattccactggagcaaggactctgtccatcg
tctcagcagatcatatacttcaaagttaacaatggattgttacttattgcgtctccttgt
cacatcgagctctggagctcttctcagcataaagtgagattagggaaatacaagagggat
tcggagtcagtgcaaagagagggcgagaatttgcaggcggtgtggagccccgacaccaaa
ttgattgctgttgttacatcgtctttatatcttcatattttcaaggtccagattacagaa
aaaagtatacaaatcggaggaaagcagccttctggtttgtttttcattaagatctctctt
gttctgaatgagcagttgccttttgcggaaaagggtttgtcagtgagcaatattgtcagt
gataacaaacacatgctacttgggctttcagatggatctttatatagtatctcatggaag
ggggagttttatggagcttttgaacttgtccactcttctaatgatagcagtgtggctgct
ttgtcccaccattttccgagcaacggtcttgcttctgtcgacacttcgggagcttttgtg
tctgatcataaatttcccataagctctgctatcatttggctggagctttgcctacctatg
aggttgctatttgttttgtattcgaatggacaactaatgtcatgctctgtgagcaagaaa
ggcttaaagctagctgaattcattaaaattgataaagagttgggttctggtgatgctgtg
tgtgcttcaatagctccagagcaacaaatccttgctgtaggtacaaggagaggggttgtt
gagctctatgacttggcagaatcagcatcacttattcgtactgtgtctttatatgactgg
ggatactccatggatgacactggtcctgttagttgtattgcttggacacctgataattct
gcttttgctgttggttggaagtcaagaggacttacagtttggtccgtgtccggatgtcgt
ctgatgtcaacgatccgtcaaatcagtttaagttctatatcctctcccattgttaagcca
aaccaagactgtaaatatgagccattgatgagtggcacctcaatgatgcaatgggatgaa
tatggatataggctatatgcaattgaggaaggatcttcagaacgagttcttatattttcc
tttggcaaatgttgtcttaacagaggggtttctggcatgacatatgctcgtcaagtaatt
tatggtgaagataggttactagttgtgcaatcggaagatactgacgaactcaaaattcta
cacctaaaccttccagtttcttatatctcccaaaattggcctgtccagcatgtggctgca
agcaaggacggaatgttcttggcagttgctggtcttcatgggttaatcttatatgatata
cggcaaaaaaaatggcgagtatttggagatattactcaggaacagaagattcagagtaaa
ggtttgttgtggctggggaagatcattgttgtctgcaactatatcgattcttctaacacg
tatgaactgctcttttacccaagatatcaccttgatcagagctcgttgctatgtcggaaa
tcattgcttgctaaaccaatagtgatggatgtctatgaagattatattcttgtgacctat
cgcccatttgatgtccacatattccatgtgaaattatttggtgaattgacaccttctacc
actccagaccttcagctttctacagtacgagaactttcaatcatgactgcaaagagccat
cccgctgctatgcgttttatccccgatcaggttccaagagaatgttctttaaacaatcat
gtttcaacttcttctgacatgttagcaagggagcctgcgagatgtttgatattgagagca
aatggggagctttcacttttggatttggatgatggacgagaaagagagcttaccgattct
gttgaattattttgggttacttgtggtcaattagaggagaaaacgagtctaattgaagaa
gtttcatggttggattacggataccgaggaatgcaggtttggtatccatctcctggtgtt
gacccttataagcaagaggatttcttgcagttggacccggagttggaattcgaccgtgaa
gtgtaccctctggggcttcttccaaatgcaggtgttgttgtcggtgtttctcaaagaatg
tcattttctgcatgcacagagtttccatgttttgaaccaactccacaagcgcaaactata
ttgcattgccttcttcggcatctccttcagagggacaaaattgaggaggcattgcggttg
gctcaattgtctgcagaaaagcctcacttttcacattgtcttgagtggcttctttttact
gtatttgatgctgaaatttcacggcaaaatataaacaagaaccagatctcaatacctaaa
cgtgctgccagcttctctcttttggagaagacttgtaatttcatcagaaattttcctgag
tatcttaatgtggtggtgagtgttgcaagaaaaactgatggtcgacattgggcagacttg
ttctctgctgctggaagatcaacagagttgtttgaggaatgcttccagagaagatggtac
cgcactgccgcttgctatattcttgtgatcgctaaacttgaaggtcctgctgtcagtcaa
tatagtgccttacgtttattacaggcaactcttgacgaatgtttatatgaactcgctggg
gagctggtgagattcttactaagatctggaagggaatatgaacaagcatctactgattct
gacaaactatctcccagatttttgggctattttctttttccttctagttataggaggcca
tctttggataaaagcacctcgttcaaggagcagagtccaaatgttgcttctgttaagaac
atcttagaaagtcatgctagctatttgatgtcaggaaaagaactttccaagcttgttgca
tttgtaaaaggcactcagtttgatttagtggaatatcttcaacgtgaaggacgtgtttgt
gctcgcttggagaattttgcttcaggacttgaactaattgggcaaaagcttcaaatgggc
acactgcagagccggttggatgcagaattccttctggctcatatgtgctctgtaaaattc
aaagagtggatagtggttctggcaactcttttgagacgatctgaggtactctttgatctt
ttccggcatgatatgcgattatgggaagcatatgccatcaccttacagtcttaccctgca
tttgctgaataccatgatctgcttgaagccttggacgaaaagctttcatctgttgtggat
tctgcaaagagatga
DBGET
integrated database retrieval system
