Citrus x clementina (clementine): CICLE_v10018607mg
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Entry
CICLE_v10018607mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K12236
transcriptional repressor NF-X1
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cic03000
]
CICLE_v10018607mg
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10018607mg
Transcription factors [BR:
cic03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
CICLE_v10018607mg
Ubiquitin system [BR:
cic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
CICLE_v10018607mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
18046766
NCBI-ProteinID:
XP_006440984
UniProt:
V4VN00
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MSSDRRDGTRNPARSARQEWVPRGSPARVVNPPPQSINPNTMNGVVENSRNMPTPDDNQH
SRNMPTPDDNQHSRNIAPRVQNGQFTNHHRGRARGENQDKKLPKDLDLPQLLQEIQDKLM
KSKVECMICYDMVKRSAPIWSCSSCFSIFHLSCIKKWARAPTSADLSAERSQGFNWRCPG
CQSVQLTSSKEIRYVCFCGKRTDPTSDFYLTPHSCGEPCGKPLESKISSAGGSEEDLCPH
KCVLQCHPGPCPPCKAFAPPRLCPCGKKMITTRCFDRKSVLTCGQHCNKHLECWRHKCEK
ICHVGPCGPCWVLVNASCFCKKKVEVVLCGDMAVKGEVKAEAGVFSCSSTCGKKLSCGHH
SCGEICHPGPCGDCELLPSKIKSCFCGKMSLQEQRKSCLDPIPACSEKCGKPLACGLHYC
DELCHAGNCPPCLAAVTQKCRCGSTSRNVECYRTTGGENFTCEKACGRKKNCGRHRCSER
CCPLSSSNSLLSGDWDPHFCQMACGKKLRCGQHSCESLCHSGHCPPCLETIFTDLTCACG
RTSFPPPLPCGTPPPSCQLPCSVPQPCGHSASHSCHFGDCPPCSVPIAKECIGGHVVLRN
VPCGSKDIRCNKLCGKTRQCGMHACGRTCHPPPCDTACYSEPGSKASCGQVCGAPRRDCR
HTCTALCHPSALCPDVRCEFPVTINCSCGRITASVPCDAGGSSSGYSSDTVYEASIVQKL
PAPLQPVESTGKKIPLGQRKLMCDDECAKLERKRVLADAFEITTPNLDALHFGESAVTEL
LADLYRRDPKWVLSVEERCKFLVLGKNRGSTNALKVHVFCPMLKDKRDAVRLIAERWKLA
VNPAGWEPKRFIVVHVTPKSKPPPRVIGVKGATTVNAPHAPVFDPLVDMDPRLVVSFLDL
PRESDISALVLRFGGECELVWLNDKNALAVFSDPARAATATRRLDHGSVYYGAVVVQNVG
APSTANAWGGPGTVKEVGALSSQRGNPWKKAVVQEMAWREDSWGEEESSAGSGDVQASAW
KNKEAPIAASINRWSVLDSETLSYSSPVSIRTEEPAKQSASQSNKGGESNASSVNVAGQP
ASSFSETELSEVVDDWEKAYD
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgatagaagggatgggactagaaatcctgcccgaagcgcccgccaggaatgg
gtcccacgaggatccccagctagagttgtgaatccaccacctcagagcatcaatccgaat
acgatgaatggtgtggttgaaaatagcagaaatatgcccactccggatgataatcaacat
agcagaaatatgcccactccggatgataatcaacatagcagaaacattgcccctagagtt
caaaatgggcaattcacaaatcatcacagggggagggcaaggggtgagaatcaggataag
aagctaccaaaggacctggatttgccacagcttttgcaagagattcaagacaagctcatg
aaaagtaaagtggagtgtatgatctgttatgatatggttaagaggtctgcaccaatatgg
tcttgttcgagttgtttctcgatttttcatctgagttgcatcaagaaatgggcacgtgca
cccacatctgctgatttgtcagcagaaaggagtcaaggctttaactggcgctgcccgggt
tgtcaatctgtgcagctcacatcatcaaaggagattcgatatgtttgtttctgtgggaag
aggacagacccaacttctgatttttatttgactccgcattcatgtggagaaccctgtggt
aagccacttgagagtaagatttccagtgctggtgggagtgaggaggatctttgtcctcac
aaatgtgtcttgcagtgccatcctggtccatgtcctccttgtaaggcatttgctccacca
cgtttgtgtccgtgtggaaagaaaatgattacaactagatgctttgatcggaagtctgtt
ctaacgtgtggtcagcactgcaataagcatcttgaatgttggcgtcacaaatgcgagaag
atatgccatgtaggtccttgtggtccttgttgggttcttgtcaatgcctcatgtttctgc
aagaaaaaggtggaggttgtactttgtggagacatggctgtaaagggggaggtgaaagca
gaagctggagttttttcatgtagttcaacttgtggaaaaaagcttagttgtggtcatcat
agctgtggagaaatttgccatcctggtccttgtggagattgtgaattgttgccaagcaag
atcaagtcttgtttctgtggaaagatgagcttgcaggagcaaaggaagagttgtttggac
ccaattccagcttgttcagagaaatgtggcaaaccacttgcttgtgggctgcactattgt
gatgagttgtgccatgctgggaactgtcctccttgtttagctgcagtcacccaaaagtgt
cgttgtggatcaacttcccgaaatgtagaatgctacagaacaacagggggtgagaatttc
acctgtgagaaagcttgtggacgaaagaagaattgcgggaggcaccggtgtagtgagcgg
tgctgccctctctctagctctaacagccttctctccggagattgggatccacacttttgt
caaatggcttgtggaaagaagctgaggtgtggacagcattcctgtgaatcactgtgtcac
agtggccattgtcctccttgccttgaaacaatctttactgatttgacatgtgcctgtggg
agaacttcatttccacctccattgccttgtggtacacctcctccttcatgtcagctccca
tgctccgttcctcagccctgtggccattcagcttctcacagttgccattttggggactgc
ccaccttgttctgtgcctatagcaaaggagtgcattggggggcacgtggttttgaggaat
gtaccttgtggctcaaaggatattagatgtaacaagctctgtggcaagacgaggcaatgt
ggtatgcatgcatgtggcagaacttgtcacccgcctccttgtgatactgcctgctattct
gaaccaggctcaaaggcttcttgtgggcaggtgtgtggtgctccaaggagggattgccgg
catacatgtactgcactatgccatccgtctgctctttgtcctgatgtaagatgcgaattc
cctgtcacaatcaattgttcttgcggccggattacagcaagtgttccctgtgatgctgga
gggagcagttctggttatagttctgataccgtttatgaagcctccattgtccagaagttg
ccagcaccacttcaacccgtggaatcgacaggcaagaaaattcccctagggcagaggaag
cttatgtgtgatgatgaatgtgctaagttggagcgtaaacgggttcttgcggatgctttt
gaaatcactaccccaaatttggatgcacttcattttggagagagtgctgtgactgagttg
cttgctgatctttataggcgtgatccaaagtgggtgctctctgtggaggaaagatgcaaa
ttcttggtgctcggcaagaacagagggtctacaaatgctcttaaggttcatgttttctgt
ccaatgctgaaggataagagggatgcagtaaggctgatagctgagagatggaagctagct
gtcaatcctgctgggtgggagccaaagcgttttattgtggttcatgttacacccaagtcc
aagcctccacctcgggtgattggggttaagggtgccaccactgtaaacgctcctcatgcg
ccagtgtttgatccactagtagatatggatcccaggcttgttgtttcctttctagatttg
cctagggagtcagatataagtgctcttgtattgagatttggaggggaatgtgaactggtt
tggttgaacgacaagaacgcattggctgtatttagtgatcctgcacgagcagcaactgct
acaaggagattggatcatggatcagtttattatggagctgttgtggtccagaatgttggt
gcaccttcgactgctaatgcatggggaggacctggaactgtcaaggaagtgggagccctt
tcttcccagagaggaaatccgtggaaaaaggctgtagttcaagagatggcttggagagaa
gattcatggggtgaagaagagtcttctgctggttctggagatgtgcaggcgtctgcctgg
aaaaataaagaagctccaattgcggcatcaataaaccggtggagtgtcctggactctgaa
acattgtcttattcatctcctgtatctattagaactgaagaacctgcaaaacagtcagca
agtcaatccaataaagggggtgaatcaaatgcaagcagtgtgaatgtggcagggcagcct
gcttcaagttttagtgaaacggagctgtcagaagtggttgatgactgggagaaggcttat
gattag
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integrated database retrieval system
