KEGG   Citrus x clementina (clementine): CICLE_v10018691mg
Entry
CICLE_v10018691mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CICLE_v10018691mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cic03041]
    CICLE_v10018691mg
   03400 DNA repair and recombination proteins [BR:cic03400]
    CICLE_v10018691mg
Spliceosome [BR:cic03041]
 Complex B
  Other components
   Prp19 complex
    CICLE_v10018691mg
 Complex C
   Prp19-CDC5 complex
    CICLE_v10018691mg
DNA repair and recombination proteins [BR:cic03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    CICLE_v10018691mg
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 18048451
NCBI-ProteinID: XP_006442689
UniProt: V4VS66
LinkDB
Position
Unknown
AA seq 993 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDENYEPGDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDTRQRKRKRRGIDYNAEIPFEKKPPPGFFDVTDEDRPVELVSFPT
TIEELEGKRRVDIEAQLRRQDIAKNKIAQRQDAPSAILQANKLNDPETVRKRSKLMLPAP
QISDHELEEIAKMGYASDLIAGNEELTEGSGATRALLANYAQTPQRGMTPSRTPQRTPAG
KGDAVMMEAENLARMRESQTPLLGGENPELHPSDFSGVTPKKREIQTPNPILTPSATPGG
MGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHDSAKLEQRRQAELRRNLRLG
LTSLPQPTNEYQIVVQPPAEEDEEPEEKIEEDMSDRLAREKAEEEARQQALLRKRSKVLQ
RELPRPPVASLELIRNSLLRADGDKSSFVPPTSIEQADEIIRKELLKLLEHDNAKYPLDE
KVAKKKKGNKRSANGPTAPIPVIEDFEEDELQEANNLIKEEAQYLRVAMGHENESLDDFV
EAHNTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQGEFEIVKKRMDDDKEKALQLEKTVK
VYTQGYEKRAENLRAQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQK
ELERTLQQRYGDLSTELERISRLIAERREQAQKAAEEKRALELAEAQATANQAAEQVSEA
SESLPSEELGSSMAVDPPCDETTGQQINTAHMDIDSGKEHTAAVTDGCLSDTVPSFEEGK
LPSHGVAVDTTGSSEVVKEDPAVDQQNVVEASNRNDALTKQESIAQETAKDDGFADESAN
KVHGAEFDKANLAAKELEAKDNLPLLNGDSTDK
NT seq 2982 nt   +upstreamnt  +downstreamnt
atgaggattatgatcaaaggaggcgtgtggaagaacacggaagatgagatcctcaaagcc
gccgttatgaaatacggcaagaatcagtgggcccgtatctcctctctcctcgttcgtaaa
tccgccaagcagtgcaaagctcgttggtacgagtggctcgatccctccatcaaaaaaacc
gaatggacgagagaggaggatgagaaattgcttcatcttgccaagcttatgccaacccag
tggagaacaattgctccaattgttggccgtactccctcacagtgccttgagaggtatgag
aaactccttgatgctgcctgtgccaaggatgagaactatgaaccaggtgatgatcctcga
aaattgcgtcctggggagattgatccaaaccctgaatcaaagcctgcacgtccagatcct
gttgatatggatgaagatgagaaggaaatgctttctgaagcacgagctcgtttagccaac
actcgtggcaaaaaggcaaaaagaaaggccagggagaaacagcttgaagaagccaggagg
cttgcttctttgcagaaaaggagagaacttaaagctgctggaattgatactaggcaaagg
aagagaaaaaggaggggtatcgactataatgcagaaatcccctttgagaagaaacctcct
ccgggtttttttgatgttactgatgaagataggcctgtggaactagttagctttccaaca
accattgaagagcttgaaggcaagagaagagttgatatagaagctcagctaagaagacaa
gatattgcaaagaataaaattgcacagaggcaggatgctccgtcggctatattgcaggca
aacaagctgaatgatccggaaacggttaggaagaggtcaaaactcatgcttcctgctcct
cagatatcagaccatgagttggaggaaattgcaaaaatgggttatgctagtgatcttatt
gcagggaatgaggaactgacggaaggaagtggtgcaactcgtgctcttcttgcaaattat
gctcagacaccacagcgtggaatgacaccatcacgaactccacagagaaccccagctggt
aagggtgatgctgttatgatggaagctgaaaacctggcccggatgagagagtctcagaca
cccttgttggggggtgagaacccagagttgcacccttcagatttttcgggggtcactcct
aaaaagagggaaattcaaacaccaaatccaatactgactccctcagcaacacctggtggc
atgggaagtactccaagaattgggatgacaccatcaagggatggctcttctttcggtgtg
accccaaaaggaacacccatcagggatgagctccacataaatgaagacttggacatgcat
gatagtgccaaacttgaacaacgaagacaagctgaattaagaagaaacttgcgtttaggt
ctaactagtcttccgcagcccacgaatgaataccaaattgttgtccaaccacccgcagaa
gaagatgaagagccagaggagaagattgaagaagacatgtctgataggctagccagggaa
aaggccgaggaagaagctaggcagcaggcattgcttaggaagagatcaaaagtgctgcag
agggagcttcctagaccccctgttgcttcattggagctaattagaaattctttgcttagg
gctgatggagacaagagttccttcgttcctcctacttctattgagcaggctgacgaaatt
ataagaaaggagctgctgaaattgctggaacatgataatgcaaaatacccacttgatgaa
aaagttgcgaagaaaaagaagggaaacaagcggtctgctaatggacccactgctcccatt
cctgtaattgaggattttgaagaagatgagctgcaagaggcaaataatttgataaaggaa
gaggctcaatatcttcgtgtagcaatggggcacgaaaatgaatcccttgatgattttgtg
gaagcacacaatacttgtctgaatgatctcatgtacttccctacccgtaatgcttatggt
ctttcaagtgtcgctggaaacatggaaaaacttgcagccttgcaaggtgaatttgagatt
gtgaaaaagagaatggatgatgataaggagaaggctttacaacttgagaaaacggtcaaa
gtttacacacaaggttatgagaaacgagctgaaaacctgcgggctcaaattcactcaact
gtcaagcagatggaaacagctggaacagagctggagtgcttcctggctttgcagaagcaa
gaacaattagcagcatcgagccgaataaatggtctgtgggaggatgttcagaagcaaaag
gagcttgagcgaacattacagcagcgctatggagatctctccactgagctggaaagaata
agccgtctcatagctgaaagaagagaacaggcacaaaaagctgccgaagaaaagcgtgct
cttgaattggctgaggctcaagccacagcaaatcaagctgctgagcaagtttcagaagct
tccgagtctttaccctcagaggaacttgggagttcaatggcagtggatccaccttgtgat
gaaactacaggccaacaaataaatactgcccacatggatattgattcagggaaagaacat
acagcagctgtcacagatggatgcttatctgacacggtaccttcttttgaagagggaaag
ttacccagtcatggggtggctgttgataccacaggcagttcagaggttgtcaaggaggat
ccagctgttgatcagcagaatgtggtggaagcgagtaaccgaaatgatgccttaaccaaa
caagagagcattgcccaagaaaccgcaaaagatgatggttttgctgatgagagtgcaaac
aaagttcatggtgctgaatttgacaaggcaaatttagccgcaaaagagttggaagccaag
gacaatctgcctctcttaaatggagattccactgacaaataa

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