KEGG   Citrus x clementina (clementine): CICLE_v10018728mg
Entry
CICLE_v10018728mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K15436  transportin-3
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03013  Nucleocytoplasmic transport
cic03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CICLE_v10018728mg
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    CICLE_v10018728mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cic03016]
    CICLE_v10018728mg
Transfer RNA biogenesis [BR:cic03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    CICLE_v10018728mg
SSDB
Motif
Pfam: Xpo1 TPR_TNPO3_IPO13_2nd TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd IBN_N NeuB DUF445
Other DBs
NCBI-GeneID: 18049477
NCBI-ProteinID: XP_006439712
UniProt: V4THW0
LinkDB
Position
Unknown
AA seq 740 aa
MELQNTVKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFC
SQTLRSKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAED
WGGGGIVNWLRDEMNSHPEFVPGFLELLTVLPEEVSNYKIAARPERRRQFEKELTSQMEV
ALSTLTACLHINELKEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLHSEILSEASV
NVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDSSKDEEDVKAIDRLFADMG
DSYVELIATGSDESMLIVHALLEVASHPEYDIASMTFNFWHSLQVILTKRDSYISFGNEA
SAEAERSRRFQVFRSAYESLVSLVSFRVQYPQDYQDLSLEDLKEFKHTRYAVADVLIDAA
SVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSVVEAEVMPQVMA
LLPKLPQQPQLLQTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMSTSEDTAAAAALA
FRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDSLHLVEALSMVITELRQDDAK
KALEMLCLPVVTPLQEIINQGPEILQKKHPRDLTVHIDRFAYIFRYVNHPEAVADAIQRL
WPIFKAIFDIRAWDMRTMESLCRACKYAVRTSKRFMGITIGAILEEIQGLYQQHQQPCFL
YLSSEVIKVVFPPEVLALIF
NT seq 2223 nt   +upstreamnt  +downstreamnt
atggagcttcaaaatacagtgaaagaagccctaaacgcactgtatcatcacccggacgat
gcggtgcgtatgcaagccgatcgatggttgcaagattttcaacacaccatcgatgcttgg
caggttgctgataatttgcttcatgatgccactagcaatctggaaacattgatcttttgt
tctcagacgcttagaagcaaggtacaacgagatgtagaagagctaccttctgaagctgtt
cgtggattacaggattccttaaacacgttattgaaaaagtttcataaagggccccctaaa
gtcaggactcagattagcattgcggttgctgctttggctgtacacatttctgccgaagat
tggggaggtggtggtattgttaactggcttcgggatgagatgaattctcatccagaattt
gtacctggatttttggagctacttacagtcttgcctgaggaagtttccaactacaagata
gcagcccgtccagaaagacgtcgccaatttgaaaaagagctgacttctcagatggaggtt
gctcttagtacattgactgcttgtttgcatattaatgaactcaaggagcaggttcttgag
gcatttgcatcttggcttcgcttgaagcataggatccctggatctgtgctggcctctcat
ccattggtgctgacagctctctcaagtttgcattctgagatactttctgaggcatctgtt
aatgtcatttctgaattgatacactactcagcagctggaagttctggtggtgccactgta
aacatgcccttaattcaagtaattgtgcctcaaattatgagtctaaaggcacatcttaca
gattcgtcaaaggatgaggaagatgtgaaagccattgatcgattatttgctgacatgggt
gattcatatgttgaactgattgcaactggttctgatgaatcaatgctgatagtacatgca
ttgttggaagttgcttcacacccagaatatgatatcgcttcaatgacttttaacttttgg
cacagtcttcaggttattctgacaaaaagggattcctatatctcatttggtaatgaggca
tctgctgaagctgagagaagtagaaggtttcaggtttttcgttcagcctatgagtctctt
gtatccttggttagcttccgagttcaatatccccaagattatcaagacctttctttggag
gacctcaaggaatttaaacacactagatatgctgttgcggatgtcctaatcgatgcagca
tcagttttaggtggtgatgcgacgctgaaaattctgtacataaagtttgttgagggtgta
gcatgctgtggaaataaacataatgaatggcgtccagcagaagctgctttattttgtatc
cgtgctatatctacttatgtatcagttgttgaagctgaagtcatgccccaggttatggct
ttgcttccgaaacttcctcaacaaccccaactgctccagactgtttgtttaaccattgga
gcatattcaaaatggtttgatgctgcatcaagtgatccatctatattggcttcagtcctc
agcattctcacaagtggcatgagcacatctgaagatacggctgcagctgcagctttggct
tttagacacatttgtgatgattgccggaaaaagctctgtggatacttggatggcctctat
aatgtataccgcacagcagttaatggggaaggtagtttgaaagtttctgccgaggactcg
ttgcatctagttgaagccttaagcatggttattacagaacttcgtcaagatgatgctaag
aaggctcttgagatgttatgcttgcccgttgttacgccattacaggaaattatcaatcaa
ggaccagaaatattgcagaagaaacatcctcgtgacttaaccgttcatatcgatagattc
gcttacatttttaggtatgtaaatcatcctgaagcagtggcagatgcaatacaaaggctt
tggcccatattcaaagctatatttgatattcgtgcttgggacatgcgaacaatggagtct
ctttgtcgagcttgcaaatatgctgtgagaacttccaaaaggtttatgggcatcacaata
ggagccattctggaggagattcaaggcttatatcaacaacatcaacagccatgcttcctt
tatctctccagtgaagttataaaggtggtcttccctcctgaagtattagcattaatattc
taa

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