Citrus x clementina (clementine): CICLE_v10018746mg
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Entry
CICLE_v10018746mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CICLE_v10018746mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10018746mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CICLE_v10018746mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
18048878
NCBI-ProteinID:
XP_006440914
UniProt:
V4VMV3
LinkDB
All DBs
Position
Unknown
AA seq
938 aa
AA seq
DB search
MDDEQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYH
TTTALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPG
NLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLVEFLDDSHFTN
VESALVALGCKECLLPMEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV
RGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRA
LNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDD
TALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSS
LIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESL
ERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRK
DGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEVFKSLATMLSELDVLL
SFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQI
ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFM
QEMLETASILKGATDSSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHE
LTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFAN
FPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEF
SDMPLETMDLKEALERVKKMKDDLEKDAGDCCWLQQFF
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgagcaaaacaagcttcccgagctcaaattagatgcgaagcaagcacgaggg
tttctctcattctacaaaaccctaccaaatgacacaagggctgttcggttctttgatcgc
agggactactatactgctcatggtgaaaatgcaactttcattgcaaagacttactaccat
accactacagctttgcgacaattgggtactggatctgatgctctttccagtgtaagtgtt
agcaagaatatgtttgaaacgattgcccgtgatctgcttctggagagaactgaccacact
cttgagctctatgagggtagtggctcaaattggagactggtgaaaagtggtactcctgga
aatctaggtagttatgaggatgttttgtttgcgaacaatgagatgcaggatacccctgtc
atcgttgcactatttccaaacttccgcgaaaatgggtgcactattgggttgggttatgtt
gatttaacgaaaagagtacttggattggttgaatttcttgatgatagccactttacaaat
gtggaatcagctttggttgctcttggttgcaaggaatgccttttgcctatggaggctgta
aaatctagcgagtgtaaaactctgcgtgatgctctgacgagatgtggggtgatgttaact
gagagaaagaagactgagtttaaaacaagggacttagtgcaggatcttgataggcttgtc
agaggttctgtggaaccagttcgagatttagtttctggatttgaaattgcacctggtgct
ttaggggcattactgtcttatgctgaattactttcagatgagagcaattatggaaactat
tatattcgaaagtatagtctggacagttacatgaggttagattctgctgctatgagggca
ctaaatgtcctggaaagcaaaactgatgcaaacaaaaattttagtttatttggtctcatg
aatagaacttgtactgctgggatgggaaagcggttactgcatatgtggctaaagcaacct
ttattagatgtgaatgaaatcaatgccaggctagacattgttcaagcatttgtggatgat
actgcactgcgccaagatctgaggcagcatctgaaaagaatctcagatatagagcgactg
atgcacaatcttgagaagagaagagcaggtttgcagcagatagttaaactttatcagtca
agtatccgacttccatacattagaagtgccctgcagcaatatgaaggacaattttcttca
ttgatcaaggaaagatatttagatcccctggagtcattaacagatgatgatcacttgaat
aagttcattgctctagtagaaacttctgttgaccttgatcaacttgagaatggagaatac
atgatttcatcaagttatgatactggtttatcagcactaaaaaatgagcaagagtctcta
gagcgtcaaatacacagtttgcacaaacaaactgcttctgatctcgatctgcctgtagat
aaggcgttaaagctagataaaggcacacaatttggacatgtctttagaattacaaagaag
gaagagccaaaaatacggaaaaagctcaccactcagtttattgtccttgaaactcgaaag
gatggagtgaaatttacgaacacaaagcttaaaaaattaggagaccagtaccaaaaggta
cttgaggagtataagaattgtcaaaaggagcttgttaatcgagttattcaaactgcagta
accttctctgaggtattcaagtctttggccaccatgctttctgaattggatgtcttactc
agttttgctgacttggcttctagctgtcctactccatacacaagaccagacatcaaccca
cctgatgtgggagatattatattagaaggaagcaggcatccttgtgtggaagctcaagac
tgggtgaattttataccaaatgattgtaaacttattaggggaaagagttggttccagatc
atcacaggacctaacatgggtggaaagtccacatttatccggcaggttggtgtgaacatt
ctgatggcacaagttggttcttttgttccttgtgacagagctagcatttctgtacgtgat
tgtatttttgctcgtgttggtgctggtgactgccaactacgtggggtttctacctttatg
caagaaatgcttgagactgcatcaatattgaagggagctactgatagctcattgataatc
attgatgagttgggccgtggaacatccacttatgacggatttggtttggcttgggccata
tgcgaacaccttgttgaagagatcagagcaccaactctgttcgcaacccactttcacgaa
ctgactgcattagctcatgaaaatgccaatgaattcaatacaaagcaaatggttggtgtg
gcaaactatcatgtcagtgctcacattgattccacaagtcgcaagctgactatgctgtat
aaggttgaaccgggagcttgtgatcaaagttttggcattcatgttgcagaatttgcaaat
tttcctgaaagtgttgtcacccttgctagagaaaaagctgctgaattggaagatttcacg
ccttctgcagtcatttcagatgatgctaaaatagaggtgggatccaagagaaaaagaata
agtgatcccaatgacatgtctagaggtgcagctcgggcacaccaatttttgaaagagttc
tctgatatgccactggagacaatggacttgaaggaggctctggaacgagtaaaaaagatg
aaggatgacttagagaaggatgcaggagactgctgctggctccagcaattcttctag
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