Citrus x clementina (clementine): CICLE_v100187642m
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Entry
CICLE_v100187642m CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14290
exportin-1
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03008
Ribosome biogenesis in eukaryotes
cic03013
Nucleocytoplasmic transport
cic03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CICLE_v100187642m
03008 Ribosome biogenesis in eukaryotes
CICLE_v100187642m
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CICLE_v100187642m
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v100187642m
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v100187642m
03016 Transfer RNA biogenesis [BR:
cic03016
]
CICLE_v100187642m
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v100187642m
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CICLE_v100187642m
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
CICLE_v100187642m
Pre-60S particles
CICLE_v100187642m
Transfer RNA biogenesis [BR:
cic03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
CICLE_v100187642m
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
CICLE_v100187642m
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
Adaptin_N
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
18049743
NCBI-ProteinID:
XP_006443178
UniProt:
V4T804
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
FHIRVLESTQENISALLMGLEYLINISYVDETEVFKVCLDYWNSFVLELFDAHNNLENPA
VTANMMGLPMPLLPSVVDGIGAQLLQRRQLYAVPLSKLRMLMICRMAKPEEVLIVEDENG
NIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEKQMLKKLSKQLSGEDWTWNNLNTLC
WAIGSISGSMMEEQENRFLVMVIRDLLNLCEMTKGKDNKAVIASNIMYVVGQYPRFLRAH
WKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVIVQVGENEPFVSELLSGL
ATTVADLEPHQIHTFYESVGHMIQAESDVQKREEYLQRLMLLPNQKWSEIIAQARQSVDF
LKDQDVIRTVLNILQTNTSVASALGTFFLSQISVIFLDMLNVYKMYSELISSSISSGGPF
ASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARES
EVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRLKFFSLLRAIATH
CFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNFQASEFCNQFYRTYF
VTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVESGLLTEPLWDAATIPYPYPNNAMFV
REYTIKLLGTSFPNMTAAEVTQFVDGLLESRNDLSTFKNHIRDFLVQSKEFSAQDNKDLY
AEEAAAQRERERQRMLSIPGLIAPNEIQDEMVDS
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
tttcatatcagagtgctcgaatccactcaagaaaatataagtgcattgctgatgggtctt
gaatatctcattaatatatcatatgtggatgaaacagaggtttttaaggtttgcttggat
tattggaactcttttgttttggagctttttgatgcgcacaataatctggaaaatcctgct
gtgacagcaaacatgatgggactaccgatgcctttgcttccaagtgttgtcgatggtatt
ggggcacagcttctgcaacggcggcagctttatgctgttccattgtccaagctgagaatg
ctaatgatctgtcgtatggctaagcctgaagaggtcctgatagttgaagatgaaaatggg
aatattgtccgcgaaaccatgaaggacaacgatgttcttgttcaatataagattatgagg
gagacattaatctacttgtcacaccttgaccatgaagacactgaaaagcagatgctaaaa
aagttaagtaaacaattgagtggtgaagattggacatggaacaatttaaacacattatgt
tgggcaataggatccatatccgggtcaatgatggaagaacaggagaacagatttctggtg
atggttattcgtgacttgctgaatctatgtgaaatgacaaaaggaaaagataacaaagct
gttattgcaagtaatattatgtatgttgttgggcagtatccaagattcttaagagcccat
tggaagttcttgaaaactgttgtgaataagttgtttgagttcatgcacgaaacacatccg
ggagttcaggatatggcttgcgacacattcctgaaaattgttcagaagtgcaagcggaag
tttgttattgtacaggtaggagaaaatgaaccatttgtatctgaacttctctcaggcctt
gcaacaacagttgcagatcttgaacctcatcagatccatacattctatgagtctgttggt
catatgattcaagcagagtctgatgtacaaaagcgggaggaatacctgcagaggttgatg
cttcttccaaaccagaaatggagtgaaattatagcacaggcacgacaaagtgttgatttt
cttaaagatcaagatgtgatcaggactgtgcttaatatattgcagacaaatacaagtgtt
gccagtgctcttggaacattttttttgtcccaaatttccgtgatcttcttggacatgcta
aatgtgtacaaaatgtacagtgagcttatatcaagtagcatttcatcaggagggcctttt
gcatctaaaacatcttatgtgaaacttctacggtctgttaaaagggaaactctgaagctc
attgagacattcctggacaaggctgaagatcagccgcagataggaaaacagtttgttccc
ccaatgatggatcctgtccttggtgactatgctaggaatgtgcctgatgctagagagtca
gaagttctttcactttttgccacaatcataaacaagtataagggtgcaatgatagatgat
gtgcctcgcatatttgaagccattttccaatgcacactggagatgataaccaaaaatttt
gaagattacccagagcatcgtctcaagttcttttctttgcttcgtgccattgctactcat
tgttttcctgctctgattcggttgtcaagtcagcaattaaaactagtcatggattcaatc
atatgggcctttcggcatacagaaaggaatattgcggaaactgggctaaatcttttattg
gagatgttgaaaaactttcaggcgtctgagttctgtaaccaattctaccggacatacttt
gtgacaattgagcaagaaatatttgccgtattgaccgacacatttcataaacctgggttc
aagttgcacgtcctagttctgcagcacctgttttgcctggttgagagtggtttattaaca
gagcctttgtgggatgctgccacaattccttatccatatccaaataatgcaatgtttgtt
cgtgaatacaccataaaacttctgggtacttctttccccaacatgactgcagcagaggtt
actcaattcgttgatggattattggaatcaagaaatgacctctctacgttcaagaatcac
atacgtgattttcttgttcaatcaaaagaattttcagctcaggacaacaaagatctatat
gcagaagaagctgccgctcagcgggaaagagagcggcaaagaatgctttctattccaggg
cttattgccccaaatgagatacaagatgaaatggtggactcatag
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