Citrus x clementina (clementine): CICLE_v10018887mg
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Entry
CICLE_v10018887mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CICLE_v10018887mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10018887mg
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10018887mg
04131 Membrane trafficking [BR:
cic04131
]
CICLE_v10018887mg
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cic04147
]
CICLE_v10018887mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CICLE_v10018887mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
CICLE_v10018887mg
Membrane trafficking [BR:
cic04131
]
SNARE
SNARE associated proteins
Others
CICLE_v10018887mg
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CICLE_v10018887mg
Exosome [BR:
cic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CICLE_v10018887mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_2
AAA_5
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
AAA_lid_PRS2_C
Viral_helicase1
AAA_7
NACHT
NB-ARC
DUF815
TsaE
ResIII
AAA_24
Zeta_toxin
Vps4_C
KAP_NTPase
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
18048255
NCBI-ProteinID:
XP_006439879
UniProt:
V4VK56
LinkDB
All DBs
Position
Unknown
AA seq
813 aa
AA seq
DB search
MADPSSSAPRPASSSDPKSSKKDYSTAILDRKKSPNRLVVDEAINDDNSVITMHPNTMEK
LQFFRGDTVLVKGKKRKDTVCVVLSDELCEESKVRVNKVVRSNLRVRLGDVVSVHPCPDV
KYGRRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIET
DPGEYCVVAPDTEIFCEGEPVKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQL
FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA
FEEAEKNAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNR
PNSIDPALRRFGRFDREIDIGVPDEVGRLEILRIHTKNMKLAEDVDLERVAKDTHGYVGS
DLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALGTSNPSALRETVV
EVPNVSWEDIGGLDNVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK
AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSS
TGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD
EASRLQIFKACLRKSPISPDVDLSALARYTHGFSGADITEVCQRACKYAIRENIEKDIER
ERRKMENPEAMEEDEVDDVDEIKAVHFEESMKYARRSVSDADIRKYQLFAQTLQQSRGFG
SEFRFADRTESAAAGAADPFSSAAAADDDDLYN
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctagctcatctgcgcctcgaccagcttcttcctctgacccgaaaagtagt
aagaaagattattcaactgctattctggaccgcaagaagtctcccaaccgtcttgtcgtt
gatgaagcaatcaatgatgataattctgttatcaccatgcatcctaacactatggaaaaa
cttcagtttttccgaggtgacactgtcttagtaaaggggaagaagcgaaaagacacagtt
tgtgttgttcttagtgatgaactatgtgaagagtcgaaagtcagagtgaacaaagttgta
cgatctaatcttagagttcgtcttggagatgtagtatctgttcatccatgccccgatgtg
aaatatggaaggcgtgttcacatccttcccattgatgatacgatcgagggtgtaactgga
aacttatttgatgcatatttgaagccttatttcatggaatcttaccggccagttaggaaa
ggcgacctttttctagtcaggggtggaatgagaagtgttgaatttaaagtaattgagacg
gaccctggtgaatattgtgttgttgcaccggatactgagatcttctgtgagggcgaacct
gtcaaacgtgaggatgaggagagattaaatgaagtaggctatgatgatgttggtggtgtt
agaaagcaaatggctcaaatccgtgagcttgtagaacttcctcttagacaccctcagctt
ttcaaatcaattggtgtgaagcccccaaaaggtatcttgctttatgggccacctgggtct
ggaaaaaccctgattgcaagggctgttgctaatgagacaggtgcctttttctttttgatt
aatggccctgaaataatgtcaaagttagctggtgaaagtgaaagcaatttaaggaaggca
tttgaagaagctgaaaagaatgcaccatctataatatttatcgatgaattagattccatt
gctccaaagagggagaagacacatggtgaagtggagaggcgtatagtatcccaacttcta
actttgatggatggcctcaagtcccgggcccatgtgattgttatgggagctactaatagg
ccgaatagcattgaccctgctcttaggagatttggaagatttgatcgtgagattgacata
ggtgtacccgatgaagttggaagattggaaattcttaggatccacacaaaaaacatgaaa
cttgctgaagatgttgatcttgaaagagttgcaaaagatacccacggttatgttggttca
gatcttgctgctctctgtacagaggctgcccttcagtgtattagggagaaaatggatgtc
atcgacttagaggatgagactattgacgccgaggtgttgaattcaatggctgtaacaaat
gagcacttccaaactgcattggggacatcaaatccttcggccttacgtgaaactgttgtg
gaggttcctaatgtctcatgggaggatattggtgggttggataatgttaagagagagctt
caagagactgttcaatacccagtggagcatcctgaaaagttcgagaaatttggcatgtca
ccttctaaaggtgttctcttctatggacctcctggctgcggcaaaacccttcttgcaaaa
gctattgctaacgagtgtcaagcaaacttcataagcgtcaaaggacctgagctgctgaca
atgtggtttggagagagtgaggcaaatgtaagggaaatctttgacaaggcacgacagtca
gctccatgtgtgctattctttgatgaacttgattctattgctactcagcgtggcagttct
actggagatgctggcggtgctgcggatagagtactgaatcaacttctaactgaaatggat
gggatgaatgccaaaaaaacagttttcatcataggcgccaccaaccggcctgacatcatc
gatccagcgttgttgaggcctgggcgtttggaccaattgatttatatacccctgccagat
gaggcttcccgtcttcagatatttaaagcttgtttacggaagtcacccatctctcccgat
gttgacctatcagctcttgcacgttatactcatggtttcagtggtgccgatatcactgaa
gtatgtcagcgtgcctgcaaatatgcaattcgagaaaatattgaaaaggatattgagagg
gagaggaggaagatggagaaccctgaagcaatggaagaagatgaggtcgatgatgtcgat
gagattaaggcagtacactttgaggaatcaatgaaatatgcccgccggagtgtcagtgat
gcagacatccggaaataccagctctttgcacagaccttgcaacaatctcgtgggtttggg
tccgaattccggtttgcagatcgtaccgagagtgccgccgctggggctgcagatccattc
tcttctgccgctgctgctgatgatgatgatctatacaactga
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