Citrus x clementina (clementine): CICLE_v10019016mg
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Entry
CICLE_v10019016mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CICLE_v10019016mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10019016mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
CICLE_v10019016mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
VWA_2
Motif
Other DBs
NCBI-GeneID:
18050206
NCBI-ProteinID:
XP_006445251
UniProt:
V4U8G7
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MKNEPALSSFTLTFAINYGDVTITASVTASVTSFISFSTQSVYSLMARTREALLLLLDVS
PSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDI
KVVDGHLVQSLKHLPQGTCAGDFLDAIVVGVDMLIKKYGETYKGKKHLCLITDALCPLKD
PDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKT
LFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAP
STDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSV
KLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQ
QSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADN
LVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPT
LLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESK
PVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVEL
LVALRKGCILEQVYLSVSFFLLWFAFAFWDNSCLNDMSSIVTFSYAS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgagccagctctttcttcttttacccttactttcgcaattaattacggcgat
gtcacaatcacagcctcggtgacagcttccgtgacaagctttatttctttcagcacacaa
tcagtctactctttaatggctcgaaccagggaagcattgttattgttacttgatgtcagt
ccttccatgcacagtgttcttccagacgttgaaaaactctgctctaggctcatacaaaag
aagctgatttatggaaaaaatcatgaagttggagttattttatttggaactgaagaaact
gaaaatgagctgactaaggaagtgggtggatatgaacatgttaaggttttgcaagatatc
aaagttgttgatggacaccttgtccaatctttaaaacatctgcctcaaggaacttgtgct
ggggattttctcgatgcaattgttgtcggggtagatatgctaataaagaagtatggagaa
acatataaaggaaagaagcatctctgtctgataacagatgcactatgtcctcttaaagat
ccagatgtgggaaccaaagaagatcaagtcagcaccattgccagacaaatggttgctttc
ggcttgagaatgaaaaatattgttgtgcgagcaagtttaagtggagaaccgcatatgaga
gtaataattgagaatgataatctattgaatattttttcaaagaaatcgagcgcaaagaca
ttgtttgttgatagtacaacttcattacgaggtgcacgtaaaactcgagatatatctcct
gtcacaatattcagaggtgaccttgaactcagcgaaaaaatgaagattaaggtatgggtt
tacaaaaagacgggagaggagaagtttcccaccctgaagaaatattctgataaagcacct
tcaactgataaatttgccacacatgaagtcaaggtggattacgaatacaaaagtgttgaa
gatcctagtaaagttgtaccccctgagcaaagaattaaaggttatcgctatggacctcaa
gtagttcctatatcttccgctgaatgggaggctgtcaagttcaaaccagaaaagagtgtg
aagcttcttggatttactgatgcttcaaacatattgcgacactattacatgaaagatgtc
aacctttttattgccgaaccgggcaattcgagggcaacagttgcagtttctgccttagcc
agagcaatgaaggaaatgaacaaggttgcaattgtgcgctgtgtgtggagacaaggacag
cagagtgttgttgttggtgtcttgacccccaatgtgtctgaaaaaataaatattcctgat
tcattctacttcaatgtactcccgtttgctgaggatgttcgagaatttcaattcccctct
ttcagcaaatttcctgtgtcttggcagccaaatgagcaacagcaggaagcagcagataac
ctggttaaaatgcttgaccttgcaccatctggcaaaggggaaattttgcagccggaattg
acaccaaatcctgccctggagcgtttctatcatcatcttgagttgaaatcagagcaccaa
gatgctgctccacctccacttgatgatagtcttaagaagattactgagcctgatcccaca
cttcttgctgaaagccagtctgctattgatgcattttgtgggcaatttgtaatcaaggag
aatcctaagctgaagaaatcaactaggcgattcctacgagagaaaccatctggctcagat
gagccaaatggtgatggcagtgtatctgatgctcaagctgtcaattccatggaaagcaaa
cctgtagttacagttgacaaaattggcgatttgacccctatccaagattttgaagcaatg
atgtctagaagagattgccccgattgggttgataaagcaattgaggatatgaaaaataaa
atatttggcctactggaaaactccaatgaagggattaattatcctaaagcagtggaactt
ttagtcgctttacgtaagggatgcatcctcgagcaagtatatctctctgtctctttcttt
ctcctgtggtttgcttttgccttttgggataattcttgccttaatgatatgtcgtctata
gtcacttttagttatgcttcttga
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