Citrus x clementina (clementine): CICLE_v10019112mg
Help
Entry
CICLE_v10019112mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CICLE_v10019112mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10019112mg
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10019112mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10019112mg
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10019112mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
CICLE_v10019112mg
Ubiquitin system [BR:
cic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
CICLE_v10019112mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
CICLE_v10019112mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
CICLE_v10019112mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-HC5HC2H_2
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
PHD_NSD
zf-RING_10
zf-RING_6
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
18050286
NCBI-ProteinID:
XP_006443772
UniProt:
V4TU52
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MADSAANSKRSFNPLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCES
ECPLCKSQCTYADLRPLAFLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSL
SANTLVQVSFNNSACDGQKGKGFELTGMGENKRDGGQNPNSAQPSSHTQAGGIRDCRPAQ
IDINQLDQLSPCSPPSFGDIKGSDNESNDQGGELSPESYLANRSVKRGFDDRTRQEHRLS
SSETAGSFRDSKRLKGFNYGPDSVGVKSSGHSQSTVFRSESLMASKSDSELKSVAALASE
KMPPISIDSCANNYICGFCQSSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEW
APQVYYVGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVKSCRRSYHVPCALEISECRW
DTENFLVLCPVHSSVKFPIEKSGHRSIRNRAVPLQLTPQEPSFWGSSPNKAKEWVFCGSA
LSVEEKLLLVRFSSMIGVPVSKFWKPNVTHVIAATDAKGSCTRTLKVLMAILNGNWVLKI
DWIKACMEAMNPVGEEPYEINLDNHGCEDGPKTGRLRALNKAPKLFDGLSFYFSGKFMLG
YKEDLQSLVITAGGTIWKSEGELLAQCCNDETAPSKVLVVYNLDFPEGSLIGEEVSTIWK
RLNEAEELASKIGCRVIGHTWLLESIAAHKLQPFLS
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggccgattccgctgccaatagtaaacgatcttttaatccgttggttcttcatcttcag
aaacttgctctcgagctcaaatgtcctctctgcttaaacttgttcagtaggccgttgttg
ctcccatgtgatcacatattttgcaattcatgcatacccagatctgcacagtgtgagtca
gagtgtcctttatgtaaatctcagtgtacttatgcagatttaaggcctttggcttttcta
gaaaacataattgcaatttataagggattggatgcttcgcctagttccaacttgcttcag
cctgtttattcagcttttggtagacatcaagaggataattcaagcagtggccagtcttta
tcggccaatacattagttcaagtttcatttaataattctgcctgtgatggccaaaaaggc
aaaggatttgaactaactggtatgggagaaaataaacgtgatggtggccagaatcccaat
tcggcacaaccaagttcccatacacaagctggaggcattcgagactgcaggcctgcacag
atagacataaaccaattggaccaattgtcaccttgcagtcctccttcatttggtgatatt
aagggttcagacaatgaaagcaatgatcagggtggggagcttagtccagaaagttatcta
gccaatcgatctgtcaagagaggttttgatgatagaacaagacaggagcatagactttct
agctctgagacagcaggttctttcagggactcaaagagactgaaaggtttcaactatggg
cctgatagtgttggtgtgaaaagttctggtcacagccaatcaacagtttttcgaagtgaa
agcttaatggcttctaaatctgattcggaacttaaatctgtggcagctcttgctagtgaa
aaaatgcctccaatttcaattgactcttgtgcaaataattatatatgtgggttttgccag
tcctctagaatttcagaggtaactggattgatgttgcactatgctaatgggaaaccagtg
gtgggagaggaggcagatcgttcacatgttatacatgttcatagtaaatgcattgaatgg
gcaccgcaagtatattatgttggagacactgttaagaatctaaaagcagaattggcaagg
ggttcaaaacttaagtgtagcagatgtgggctaaagggagcagccctaggttgttatgtg
aagtcttgccggagaagttatcatgttccttgtgctctggaaatttctgaatgtcggtgg
gacactgaaaactttcttgtactttgtccagtgcattcttcagtcaaatttccaattgag
aagtctggacatcgcagcataagaaatcgtgctgtaccactccaattaactccccaggag
cctagcttttggggatcttcacctaataaagcaaaagaatgggttttttgtggatctgct
ctgtctgtggaggagaagcttcttttggtcaggttcagtagcatgattggtgtaccagtg
agcaagttctggaaaccaaatgtcactcatgtgattgcggctacagatgctaagggttcg
tgcaccaggacactgaaagttctcatggccattttgaatgggaattgggttcttaagatt
gactggataaaagcatgcatggaggctatgaatcctgtgggtgaagagccttatgaaatt
aatcttgacaaccatggatgtgaagatggcccaaaaactggcagacttagggcattgaat
aaagcaccaaaactctttgatggtttaagtttttatttcagtggtaagttcatgttgggt
tacaaggaagatctacagagtctggttattactgcagggggtaccatttggaagagtgag
ggtgaattattggcacaatgttgcaatgacgagacagctccttctaaggtattagtagtt
tataatcttgacttcccagaaggatctttgattggagaagaagtttcaactatttggaag
agattaaatgaagcagaggaattggctagcaaaattggatgccgagtcattggtcacact
tggcttttggaatcaattgctgcacataagctacagccttttctcagctga
DBGET
integrated database retrieval system
