Citrus x clementina (clementine): CICLE_v10019202mg
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Entry
CICLE_v10019202mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00040
Pentose and glucuronate interconversions
cic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CICLE_v10019202mg
Enzymes [BR:
cic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CICLE_v10019202mg
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
18047640
NCBI-ProteinID:
XP_006443655
UniProt:
V4TYR0
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MGLRANTHSTECAYGQIHILRNAPPGKYTFYGMRLRANTHSTECAYGQIHILRNGPTGKY
TFYGLRLRANIHYTKCAYGQIYVFYGMHLRAECTYGQNVTKSILFPYLSNFYEIFRLRKL
VKHIEPLCYPIVNDNLNPSKLWALVIARPITKTDLFDFALRKPSRRDQIAFYLTQFRSIF
FSFSQFINTRRERERERATVTVKERTRESSEAATMVVSYQIRFSVCTLLILWLFVTANAS
TEKHELDSRFLKNEQLQSSNNSSMPERIEFDDEEWTHEHAVDNPDEIAATVDMAIRNSTE
RRKLGYFSCGTGNPIDDCWRCDSRWYLRRKRLADCAIGFGRNAVGGRDGRYYVVSDPGDD
DAVNPKPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACIT
IQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSN
CADGLIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRM
PRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQGNRYLAPENTFAKEVTKRVDTSTAVW
RGWNWRSEGDMLLNGAYFTPSGAGSGASYARASSLGAKSSSSVGTLTSNAGALRCRRGRL
C
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgggcttacgggcaaatacacattctacggaatgcgcctacgggcaaatacacattcta
cggaatgcgcctccgggcaaatacacattctacggaatgcgcctccgggcaaatacacat
tctacggaatgcgcctacgggcaaatacacattctacggaatgggcctacgggcaaatac
acattctacggactgcgcctacgggcaaatatacattatacgaaatgcgcatatgggcaa
atatatgtattttacggaatgcacttacgggcagaatgcacttacgggcaaaatgttaca
aaatcaatcctctttccttatctaagcaatttctatgaaattttccgattaagaaaatta
gtgaaacatattgaaccactatgttatcccattgtgaacgacaatttgaacccatccaag
ttatgggcactcgtcattgcgcgtccaatcaccaaaacggacctcttcgattttgctctc
agaaaaccttctagacgggatcaaatagctttttatttgactcaatttcgttccattttt
ttttcattctcccaatttattaacacgcggagagagagagagagagagagagccactgtc
accgtgaaagagagaacgagagagagctctgaagcagcaacaatggtggtttcttatcaa
atacggttctctgtatgtacattgctgattctatggctgtttgttacagctaatgcctca
acggagaagcacgagctagattcaaggttcttgaaaaatgagcagttgcagagctcgaac
aactcatcaatgccggagaggattgaattcgatgatgaggagtggactcatgagcacgct
gttgataatccggatgaaattgctgctacggtggacatggcaattcgcaatagcactgaa
aggagaaaattgggatatttctcatgtggaaccggcaacccaattgatgattgctggcgc
tgtgatagccggtggtatttgcgccgaaagcggcttgctgactgtgccatcggttttgga
cgcaacgccgtcggtggccgcgatggcaggtattatgttgttagcgacccaggggatgat
gacgcagttaaccccaaaccaggcacactaaggcacgctgtcattcaggacaggcctttg
tggattgtgttcaagcgagacatggtgatcacactcaagcaagagcttattatgaacagc
tttaagacaattgatggccgtggtgtcaatgtacacattgccaatggtgcttgcatcaca
atccaattcatcacgaatgtcattattcacggtataaatatccatgactgcaaacctact
gggaatgccatggttcgtagctcgccgagtcattatgggtggagaacaatggccgatgga
gatgccatttctatttttggatcaagccatatttggattgatcacaattctctatctaat
tgtgctgatggtcttattgatgctattatgggatcaacagcaattaccgtctccaacaac
tacttcacccaccacaatgaggttatgctattgggccacagtgattcctacactagagac
aaggtgatgcaagtgaccatagcttacaaccattttggggaaggtcttatccaaagaatg
ccaaggtgtaggcatgggtatttccacgtggtgaacaatgactacacacactgggtaatg
tatgcgattggtggaagtgctaatcccacgattaacagccagggaaacagatatcttgcc
ccagaaaatacttttgctaaagaggttaccaagagggttgacacgtcaactgctgtatgg
aggggctggaattggagatcagagggagacatgttgctgaatggagcctacttcactcca
tcgggagctggatctggcgccagctacgcaagggcctccagcttaggggctaaatcttct
tcttcggtcggcactcttacatctaatgccggtgcccttagatgccgccgtggtcgccta
tgctga
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