Citrus x clementina (clementine): CICLE_v10019221mg
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Entry
CICLE_v10019221mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K23720
UV-stimulated scaffold protein A
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CICLE_v10019221mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10019221mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
CICLE_v10019221mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
18046201
NCBI-ProteinID:
XP_006444834
UniProt:
V4VXF2
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MEEQGGKVRALIDKATNSTEREVDPRLLKAIKWVVRNSDSELRLAAQTLMDLMKRDHSQV
RYLTLLIIDELFMRSKLFRTILVENMDQLLSLSIGFRRNLPLPAPPAIASILRSKAFEFL
EKWNASFGVHYRQIRLGFDYLKNTLRLQFPNLQANAARIQRERREREMRTKEILRNKFEM
LRQNLSSIKEEIQSTIDEIGECLDIIRAKEEIMLLDPLDDEDFEEFHSSELRQIRLDSLK
EGEKVHEDEDNKVVFDALRELYKLLVTKHLVLVQEWISVLIRVEVSDNRSRDKMLKEFID
IQNRLQLVKKKCEDSGCGLINNVKPLIEDELEEDFWEEGKIGSSESGSSNASSKHNSNLS
MVLASSEVIGKASEVPKQKSDGNDSLDNEGSKIDSTLLRSKLLAEAPVIVCGSFSDNLKR
DVLVNQRGMEFDNHWGRVDYDAVIPAEKIAELNLRATLYKEEQVEIQPCRAPLRKGGLCQ
RRDLEVCPFHGPIIPRDDEGNPINQSTSSIEKSSLTDETLTDLGSDLVEQLAKHAIKNVR
ERDKEEARKRKIDKQLLNRAKLAKVREHNEAVLRDAALASTSRSATAGDEAEDTNGRRSS
SRNKKQTLASMLRKKVTPRDRLTRRLLNTRARDATIRRLRMGEDAIYRESFPNQW
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcaaggagggaaggtgagggccttgatagacaaggcgacgaactcgacggaa
cgagaggtggacccacgtctcctcaaggccattaaatgggtagttcgaaattcggattcg
gagctgcgactcgccgctcaaaccctcatggaccttatgaaacgcgaccattctcaggtc
cgatatctcacacttctcataattgatgaactcttcatgcgatcaaagctttttaggacc
attcttgttgagaacatggatcagttattgagtttaagtattggattcagaagaaattta
ccacttcctgcgcctccagctattgcatctattttgcgatcaaaggcttttgaatttttg
gagaaatggaatgcttcttttggggttcactacagacaaattagattaggctttgattac
cttaaaaatactctcaggctccagtttcctaatttacaagcaaatgcagctcggattcag
cgggagagacgggaaagagagatgaggacaaaagagattttacgaaacaagtttgaaatg
ctgcggcaaaatctttcttcgataaaggaagaaatacagtcgacaatagatgagattgga
gagtgtttagacatcattcgtgccaaggaagaaattatgctgcttgatcccttggatgat
gaagattttgaggagttccattcttctgaattgaggcagattcgccttgattcattgaaa
gaaggggaaaaggttcacgaggatgaagataataaagtagtttttgatgcactgagggag
ttgtacaagcttctagtgacaaagcatttggttttggtccaagaatggatttctgttctt
attagggtggaagtgtcagacaataggtctagagataaaatgctgaaggagttcattgat
attcaaaatcgcctccaattggtgaagaagaaatgtgaagactctggctgtggtcttata
aacaatgtgaaacctctcatagaagatgaattagaggaagatttttgggaagagggtaag
attgggtctagtgagagtgggagttcgaatgcatctagtaagcacaatagtaatctgtcc
atggtattggcctccagtgaggtcataggtaaggcttctgaagtccccaaacagaagtct
gatgggaatgattctctggataatgaaggtagtaaaattgattcaacattgctcagaagt
aagcttctggcagaagctccagtgattgtatgtggttctttctcagataatttgaaaagg
gatgttttggttaatcaaaggggcatggagtttgacaatcactggggtagggtagactat
gatgcagttattccagcggagaagatagcagaattgaaccttagggcaactctttacaaa
gaagagcaagtagaaatccaaccatgccgtgctcctttgaggaaaggaggcctttgtcag
agaagggatttagaagtctgcccatttcatggacccatcattccccgagatgacgaagga
aatcctatcaatcagagcacatcatcgatagaaaagagctctttaacggatgagacttta
acagatttggggtctgatttagtggagcaattagcaaaacacgctataaagaatgtaagg
gagagagataaagaggaagctaggaagaggaaaattgataaacagttgctgaatcgagca
aaacttgcaaaagtacgggaacacaatgaagcagttttacgggatgctgccttggcttca
acttcaaggtctgcaactgcaggagacgaggcagaagatacaaatgggaggagatcgtca
tcaagaaacaagaagcaaactctagcttccatgctgcgaaagaaagtaactccaagagat
aggttaactcgcagacttctgaatacccgagcaagggatgcaacaataagacggctgaga
atgggtgaggatgcaatttacagagagtcctttccaaatcagtggtaa
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