Citrus x clementina (clementine): CICLE_v10019317mg
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Entry
CICLE_v10019317mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03030
DNA replication
cic03420
Nucleotide excision repair
cic03430
Mismatch repair
cic03440
Homologous recombination
cic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CICLE_v10019317mg
03420 Nucleotide excision repair
CICLE_v10019317mg
03430 Mismatch repair
CICLE_v10019317mg
03440 Homologous recombination
CICLE_v10019317mg
03460 Fanconi anemia pathway
CICLE_v10019317mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cic03000
]
CICLE_v10019317mg
03032 DNA replication proteins [BR:
cic03032
]
CICLE_v10019317mg
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10019317mg
Transcription factors [BR:
cic03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
CICLE_v10019317mg
DNA replication proteins [BR:
cic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
CICLE_v10019317mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
CICLE_v10019317mg
MMR (mismatch excision repair)
CICLE_v10019317mg
DSBR (double strand breaks repair)
HR (homologous recombination)
CICLE_v10019317mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
18049728
NCBI-ProteinID:
XP_006440765
UniProt:
V4TQK0
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSN
LSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESG
IIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSL
NPYQGNWTIKVRVTSKGNMRTYKNVRGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRF
QLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL
GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATN
VGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVNPDLPEAKKLKSWYESEGKG
TSMASIGSGLGSLAKSGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAM
WYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAER
IIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAP
VDFAAESKFLLEEISKKVSHQNA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggacaagacagtgagtccggatgcaatttcaacgattttatcaaacccatctcctgac
tcgtcctctgatattccagagatcgttgttcaagttttagatctcaagctcaccggcaat
cgatacatgtttaatgcgagtgatgggaagaagagattaaaagcaattttgccttcaaat
ttatcatcggaggttatttctggaaacattcaaaacaagggtcttattcggcttcttgat
tatgcgctcaatgaaatcccaactaaatctgagaaatacctgattgtgacgaaatgtgag
gtggtgtctcctgcacttgaaatggagatcaagattgaggtgaagagtgatgaatctggc
ataatatttaaaccaaaacaagaagatgaggtaaaaaaagatgggcctggcattgttttg
aaacctaagcaagagatggttgccaaatctgctgctcaaatattacgcgatcagaatgga
aatatggcccctgctgcccgcttggctatgacaagaagggttcatcctcttgtttctttg
aatccttaccaaggtaattggaccatcaaggttcgtgttacaagcaaaggaaacatgcgt
acttataagaatgtgagaggtgaaggatgcgtcttcaatgtggagttaacagatgaagat
ggtacacaaatacaagcaacaatgttcaatgaagctgcaaggaaattctatgacaggttc
caattagggaaggtgtattacatatctaggggaactctgagggttgccaataagcagttt
aagactgtacaaaatgattatgaaatgaacttgaatgagaattctgaggtggaagaagct
gttaatgaaacagcattcattcctcaaacaaaatttaactttgtgcctattgatgagttg
gggcgttatgtcaatgggactgaacttgttgatattattggagttgttcaaaatgtttct
ccaacaatgagcattcgaaggaagagtaacaatgaaatggtaccaaagcgtgatatcact
gttgcagatgagacgaagaggacagttactgtttctttgtggaatgagctggcaactaat
gttggccaggaattgcttgacaatgctgataaatctcccatagttgcaattaaatccctt
aaagtaggagattttcaaggcatctctttgtcaactctaggcagaagcacagtattagtc
aatccagatttgccagaagcaaagaagttgaagtcctggtatgaatctgaaggtaaagga
acttcaatggcttctattgggtctggtttgggttctctagctaagagtggagccaggtct
atgtactcagatcgagtatcccttacccacataacaagtaacccatccttgggtgatgaa
aagccagtgttttttagcatcaaagcatacataagcttaatcaagcctgatcaagcaatg
tggtaccgtgcttgcaaaacttgcaacaagaaagtgacagatgccctgggatctgggtat
tggtgtgaagggtgccaaaaaaatgatgaagaatgtagtttaagatacataatggttgca
agggtctgtgatggaagtggcgaagcttggatttctatattcaatgaggaagcagaaagg
atcattggatgctctgctgatgagcttaatgaattgaagtcacagttaggagatgataat
tcatatcaaatgaaattgaaagaagttacttgggttcctcatctcctccgagttagtgtt
gctcaacaagagtacaacaatgagaagagacaaagggtaaccgtcagggctgttgctcca
gttgactttgctgctgaatccaaatttttgctggaagagatatcgaagaaagtttctcat
cagaatgcctaa
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