Citrus x clementina (clementine): CICLE_v100194172m
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Entry
CICLE_v100194172m CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03015
mRNA surveillance pathway
cic04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CICLE_v100194172m
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
CICLE_v100194172m
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cic01009
]
CICLE_v100194172m
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v100194172m
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v100194172m
Protein phosphatases and associated proteins [BR:
cic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
CICLE_v100194172m
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
CICLE_v100194172m
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
CICLE_v100194172m
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
PPFR1_M
HEAT_2
PIK3R4-like_middle
RELCH_N
RELCH_C
Vac14_Fab1_bd
HEAT_EF3_N
Htt_N-HEAT_1
HEAT_GCN1_C
PDS5
TPR_DNAAF5
HEAT_EZ
Adaptin_N
HEAT_MROH2B_C
TPR_TNPO3_IPO13_3rd
ARM_TBCD_2nd
Arm
TAF6_C
HEAT_GCN1
Cnd1
HEAT_GCN1_2
HEAT_GCN1_C_2
Motif
Other DBs
NCBI-GeneID:
18047517
NCBI-ProteinID:
XP_006440946
UniProt:
V4TWC2
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
FYKVRRTELTQDDQDSVRLLAVEGCGALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMV
ANQLYELCEAVGPEPTRSDVVPAYVRLLRDNEAEVRIAAAGKITKICRILNPELAIQHIL
PCVKELSSDSSQHVRSALATVIMGMAPILGKDATIEQLLPIFLSLLKDEFPDVRLNIISK
LDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALC
MQWLKDKVYSIRDAAANNVKRLAEEFGPDWAMQHIVPQVLEMINNPHYLYRMTILQAISL
LAPVMGSEITCSQLLPVVINASKDRVPNIKFNVAKVLQSLIPIVDQSVVEKSIRPCLVEL
SEDPDVDVRFFATQALQSKDQVMMSG
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
ttttacaaagtacggaggacagaacttacacaggatgatcaagattctgtgcgattgttg
gctgttgagggttgtggagctctaggaaagttgttggaaccccaggattgtgtggcacat
attcttcctgttatagttaatttctctcaggataagtcttggcgtgttcgttacatggtt
gcaaatcaattatatgagctatgcgaagctgttggtcctgagcctaccaggtcagatgtg
gttcctgcatatgttcggctacttcgtgataatgaggctgaagtgcgtatagctgctgca
ggaaaaataacaaagatttgccgaatcttgaatccagaacttgcaatccagcatattctt
ccttgtgtaaaggaattgtcatcagattcgtcccagcatgtacgttctgctttggctact
gttataatgggaatggctccaattttaggaaaggatgcaacaatagagcaactgctccct
attttcctttctcttctaaaggatgaatttcctgatgtccgactgaatattattagcaag
cttgatcaagtcaaccaggtgattggaattgacctgctgtcccaatctctattgccagca
attgttgagcttgcagaggatagacactggagggttcgacttgcaataatagagtacata
ccactattggcaagtcagttgggtgtagggttctttgatgataagcttggtgctctttgc
atgcaatggttaaaagataaggtttattccattcgtgatgctgctgccaacaatgtgaaa
cgtctggcagaagaatttggccctgattgggcaatgcagcatatagttccacaggttttg
gaaatgattaacaacccacattatttgtatcgaatgactattcttcaagcaatttctctt
cttgcccctgttatgggctctgaaattacatgttcacaacttctgcctgtggtcattaat
gcatcaaaagatagggtaccaaacatcaaattcaatgtagcgaaagtgttgcagtcactt
attcccatagttgatcagtctgtggtggagaagtcaatccgtccatgtttggttgagctg
agtgaggatccagatgttgatgtcagattttttgccacccaagcactgcagtcaaaagat
caggtcatgatgtccggctag
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