Citrus x clementina (clementine): CICLE_v10019497mg
Help
Entry
CICLE_v10019497mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03504
DNA polymerase delta subunit 3
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03030
DNA replication
cic03410
Base excision repair
cic03420
Nucleotide excision repair
cic03430
Mismatch repair
cic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CICLE_v10019497mg
03410 Base excision repair
CICLE_v10019497mg
03420 Nucleotide excision repair
CICLE_v10019497mg
03430 Mismatch repair
CICLE_v10019497mg
03440 Homologous recombination
CICLE_v10019497mg
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cic01009
]
CICLE_v10019497mg
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cic03032
]
CICLE_v10019497mg
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10019497mg
Protein phosphatases and associated proteins [BR:
cic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CICLE_v10019497mg
DNA replication proteins [BR:
cic03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
CICLE_v10019497mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
CICLE_v10019497mg
MMR (mismatch excision repair)
DNA polymerase delta complex
CICLE_v10019497mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
18046266
NCBI-ProteinID:
XP_006442421
UniProt:
V4U0K8
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MKIHTNRFINKSIYTFLTLKCHPKNLTGIAYKSRFGGVAGKLVPFEESQSPGKMPEIETL
GILDEIQALVSDHLQVVSYKWLSRNFLVSSNTAKRLLQEFVVKHGNGLEVVYTLSGWLKS
SPPSYNIRLVSEPKLAEAKQEFDGNCSIQVYSVQACIPKDPAALWNAEFVQAEELFKQPS
AVDNCLRDNRFCGISNSFVKRGAEGTPVSNASLQLKIAAIPDLTKTNTAHHNNTVPPCLQ
NKVQQSSPKVGLMSSNVVKVVKGQSNGTGAHDQVTKPSVHEEKLQPLPANIQNKSSSGNG
GSLANLWGRASSKSKPNSAPADASAGVVQDVSNEDDAEDVNFRRASNGEGKRKRKVVFDL
SDEDEYEDAVNLASPDLPKGQSSLAPEQSKKVLVTEKPNLIFDELIEDKPKVKEEKATDL
EPNHSEDSSVVSTRTITETSITEKIQKCVPEKDVHKDKVADSSAQSPKRRKVVKTRIDER
GREVTEVLWEGEESEMKKPDSGTMQKADNTMKKAESNTVADNVKRPAAAKKSPALGSNAP
SNAGNKAGNKKAGNQKDPKQGNILSFFKRV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcatactaatcgatttattaacaaaagtatttacacatttttaaccttgaaa
tgccacccaaaaaatctcaccggcatcgcctataaaagccgattcggaggagtggcggga
aaattggtgccctttgaagaatctcaatccccaggaaaaatgcccgaaatcgaaacccta
ggtattctcgacgagattcaggctctcgtctctgatcatcttcaagtggtttcatataag
tggctgagtcgcaattttttggtgtcttcaaataccgcaaagaggctgcttcaagagttt
gttgtgaaacatggaaatgggttggaagtagtatacactttatccggctggttgaagagt
agtcctccaagttataatataaggcttgtttctgagcctaaacttgcagaagccaagcaa
gaatttgatggcaattgctcaattcaggtctatagtgtgcaagcttgtatcccaaaggat
ccggcagcactttggaatgctgaatttgtacaagccgaagagctcttcaagcagccttca
gcagttgataactgcttgagagataataggttctgtgggatttcaaattcctttgtcaag
cgcggtgctgagggaactcctgtaagcaatgcttctttgcagcttaaaattgcagcgatc
ccagacctgacaaaaactaacactgcacatcataacaatacagttccaccatgtttgcaa
aataaagttcagcaatcaagcccaaaggtgggtctgatgtcatccaatgtggtaaaagtg
gtcaaaggtcaaagtaatggcacaggagctcatgatcaagttaccaagccttctgttcat
gaagaaaaactacagcctttgcctgcaaatatacagaataaaagctcttctggtaatgga
ggttcattagcaaatttatggggtcgtgcatcttcaaagtcgaagcccaatagcgcacca
gcagatgctagtgcgggagtggtgcaggatgtgagcaatgaagatgatgctgaagatgta
aattttagaagagcctccaatggggaaggcaaaaggaaaagaaaggtagtttttgatctc
tcagatgaagatgagtatgaagatgcagtcaatttggcatcacctgatctaccaaaggga
cagtcaagtctagctccagagcaaagtaaaaaagttttagttactgaaaaacccaatttg
atttttgatgagctaatagaagataaaccaaaagtaaaggaagagaaagcaactgatctg
gaacccaaccattcagaagactcttcagttgtcagcacaagaacaatcactgaaacttcc
attacagagaagattcagaagtgtgttcctgagaaggatgtacataaggataaagtggct
gattcttcagcccaatcacccaaaagaagaaaagttgtgaagacacggatcgatgaacgt
gggagagaagtaactgaagttttatgggagggtgaggaaagtgaaatgaagaaacctgac
agtggaacgatgcagaaagcggacaatacgatgaagaaagctgagagcaatactgtcgcc
gacaatgttaaaaggccggcggcagctaaaaagtctccagcattaggaagcaatgcaccg
tctaatgcagggaataaagcaggaaacaagaaagctggaaatcagaaggatcctaaacag
ggcaacattctttctttctttaagagggtatga
DBGET
integrated database retrieval system