KEGG   Citrus x clementina (clementine): CICLE_v10019497mg
Entry
CICLE_v10019497mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K03504  DNA polymerase delta subunit 3
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03030  DNA replication
cic03410  Base excision repair
cic03420  Nucleotide excision repair
cic03430  Mismatch repair
cic03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CICLE_v10019497mg
   03410 Base excision repair
    CICLE_v10019497mg
   03420 Nucleotide excision repair
    CICLE_v10019497mg
   03430 Mismatch repair
    CICLE_v10019497mg
   03440 Homologous recombination
    CICLE_v10019497mg
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cic01009]
    CICLE_v10019497mg
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cic03032]
    CICLE_v10019497mg
   03400 DNA repair and recombination proteins [BR:cic03400]
    CICLE_v10019497mg
Protein phosphatases and associated proteins [BR:cic01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     CICLE_v10019497mg
DNA replication proteins [BR:cic03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    CICLE_v10019497mg
DNA repair and recombination proteins [BR:cic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      CICLE_v10019497mg
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     CICLE_v10019497mg
SSDB
Motif
Pfam: CDC27
Other DBs
NCBI-GeneID: 18046266
NCBI-ProteinID: XP_006442421
UniProt: V4U0K8
LinkDB
Position
Unknown
AA seq 570 aa
MKIHTNRFINKSIYTFLTLKCHPKNLTGIAYKSRFGGVAGKLVPFEESQSPGKMPEIETL
GILDEIQALVSDHLQVVSYKWLSRNFLVSSNTAKRLLQEFVVKHGNGLEVVYTLSGWLKS
SPPSYNIRLVSEPKLAEAKQEFDGNCSIQVYSVQACIPKDPAALWNAEFVQAEELFKQPS
AVDNCLRDNRFCGISNSFVKRGAEGTPVSNASLQLKIAAIPDLTKTNTAHHNNTVPPCLQ
NKVQQSSPKVGLMSSNVVKVVKGQSNGTGAHDQVTKPSVHEEKLQPLPANIQNKSSSGNG
GSLANLWGRASSKSKPNSAPADASAGVVQDVSNEDDAEDVNFRRASNGEGKRKRKVVFDL
SDEDEYEDAVNLASPDLPKGQSSLAPEQSKKVLVTEKPNLIFDELIEDKPKVKEEKATDL
EPNHSEDSSVVSTRTITETSITEKIQKCVPEKDVHKDKVADSSAQSPKRRKVVKTRIDER
GREVTEVLWEGEESEMKKPDSGTMQKADNTMKKAESNTVADNVKRPAAAKKSPALGSNAP
SNAGNKAGNKKAGNQKDPKQGNILSFFKRV
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgaaaattcatactaatcgatttattaacaaaagtatttacacatttttaaccttgaaa
tgccacccaaaaaatctcaccggcatcgcctataaaagccgattcggaggagtggcggga
aaattggtgccctttgaagaatctcaatccccaggaaaaatgcccgaaatcgaaacccta
ggtattctcgacgagattcaggctctcgtctctgatcatcttcaagtggtttcatataag
tggctgagtcgcaattttttggtgtcttcaaataccgcaaagaggctgcttcaagagttt
gttgtgaaacatggaaatgggttggaagtagtatacactttatccggctggttgaagagt
agtcctccaagttataatataaggcttgtttctgagcctaaacttgcagaagccaagcaa
gaatttgatggcaattgctcaattcaggtctatagtgtgcaagcttgtatcccaaaggat
ccggcagcactttggaatgctgaatttgtacaagccgaagagctcttcaagcagccttca
gcagttgataactgcttgagagataataggttctgtgggatttcaaattcctttgtcaag
cgcggtgctgagggaactcctgtaagcaatgcttctttgcagcttaaaattgcagcgatc
ccagacctgacaaaaactaacactgcacatcataacaatacagttccaccatgtttgcaa
aataaagttcagcaatcaagcccaaaggtgggtctgatgtcatccaatgtggtaaaagtg
gtcaaaggtcaaagtaatggcacaggagctcatgatcaagttaccaagccttctgttcat
gaagaaaaactacagcctttgcctgcaaatatacagaataaaagctcttctggtaatgga
ggttcattagcaaatttatggggtcgtgcatcttcaaagtcgaagcccaatagcgcacca
gcagatgctagtgcgggagtggtgcaggatgtgagcaatgaagatgatgctgaagatgta
aattttagaagagcctccaatggggaaggcaaaaggaaaagaaaggtagtttttgatctc
tcagatgaagatgagtatgaagatgcagtcaatttggcatcacctgatctaccaaaggga
cagtcaagtctagctccagagcaaagtaaaaaagttttagttactgaaaaacccaatttg
atttttgatgagctaatagaagataaaccaaaagtaaaggaagagaaagcaactgatctg
gaacccaaccattcagaagactcttcagttgtcagcacaagaacaatcactgaaacttcc
attacagagaagattcagaagtgtgttcctgagaaggatgtacataaggataaagtggct
gattcttcagcccaatcacccaaaagaagaaaagttgtgaagacacggatcgatgaacgt
gggagagaagtaactgaagttttatgggagggtgaggaaagtgaaatgaagaaacctgac
agtggaacgatgcagaaagcggacaatacgatgaagaaagctgagagcaatactgtcgcc
gacaatgttaaaaggccggcggcagctaaaaagtctccagcattaggaagcaatgcaccg
tctaatgcagggaataaagcaggaaacaagaaagctggaaatcagaaggatcctaaacag
ggcaacattctttctttctttaagagggtatga

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