KEGG   Citrus x clementina (clementine): CICLE_v10019906mg
Entry
CICLE_v10019906mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
cic  Citrus x clementina (clementine)
Pathway
cic04136  Autophagy - other
cic04145  Phagocytosis
Brite
KEGG Orthology (KO) [BR:cic00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    CICLE_v10019906mg
   04136 Autophagy - other
    CICLE_v10019906mg
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cic01002]
    CICLE_v10019906mg
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cic04131]
    CICLE_v10019906mg
   03029 Mitochondrial biogenesis [BR:cic03029]
    CICLE_v10019906mg
Peptidases and inhibitors [BR:cic01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   CICLE_v10019906mg
Membrane trafficking [BR:cic04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    CICLE_v10019906mg
Mitochondrial biogenesis [BR:cic03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    CICLE_v10019906mg
SSDB
Motif
Pfam: Peptidase_C54
Other DBs
NCBI-GeneID: 18050201
NCBI-ProteinID: XP_006441971
UniProt: V4TZ80
LinkDB
Position
Unknown
AA seq 444 aa
MKGFREKAGASKCFSKSTPDTPNRSLASVGSEPGSSETAVKRLVTAGSMRRIHERVLGPS
RTGISSSTSDIWLLGVCHKIAQDEALGDAAGNNGLAEFNQDFSSRILISYRKGFDPIGDS
KITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFS
IHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQSLPMAIYVVSGDEDGE
RGGAPVVCIDDASRHCSVFSKGQADWTPILLLVPLVLGLEKVNPRYIPTLRLTFTFPQSL
GIVGGKPGASTYIVGVQEESAIYLDPHDVQLVINIGKDDLEADTSTYHSDVIRHIHLDSI
DPSLAIGFYCRDKDDFDDFCARASKLAEESNGAPLFTVTQTHKKPVNHSDVLGETGGVPE
DDSLGVMSMNDAVGNAHEDDWQLL
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgaagggatttcgtgaaaaggctggtgcttcaaaatgtttttctaaaagtacacctgat
acaccaaacagatctttggcatctgttggttcagagccgggatctagtgagacagctgtg
aagagactagtgactgctggctcaatgaggagaatacatgaacgtgtactagggccgagc
aggactggaatttctagctcaaccagtgacatatggcttcttggtgtgtgccataaaatt
gcacaggatgaggccttgggtgatgcagctggtaacaatggattagcggaattcaatcaa
gatttttcatcaagaattctgatttcatatcgtaaaggttttgatcctattggtgattca
aagattacaagtgatgtaggctggggttgcatgcttcgaagtagtcagatgcttgttgca
caggcattgctttttcatcgattgggaagaccttggagaaaacctttgcagaagccattt
gatcgtgaatatgttgagatcttgcacctttttggtgattctgagacatcacctttctcc
attcacaatcttcttcaagctggaaaggcttatggccttgcagctggatcatgggttggc
ccatatgccatgtgtcgctcatgggaagctctagctcgttgtcagagagcggaaactggc
cttggatgccagtcacttccaatggctatttatgttgtttcaggtgatgaagatggggag
cgaggtggagctccagttgtgtgtattgacgatgcatctagacattgttctgtgttttca
aaaggtcaagctgactggacaccaattcttctgcttgttcccttggttctcggacttgag
aaagtaaatcccaggtacattccaaccttgcggttgacattcaccttcccccaaagcctt
ggcatcgtgggtgggaaacctggtgcctcaacttacattgttggtgtgcaagaagaaagc
gctatctaccttgatccacatgacgttcagctggttataaatattggaaaggatgatcta
gaggctgacacttcaacatatcatagcgatgtcattaggcacattcatctggattcaatt
gatccatcattggcgataggattctactgtagggacaaagatgattttgatgatttttgt
gcccgggcatccaagctagcagaggagtcaaatggtgctccattattcacggtgactcaa
actcataaaaagccagtcaatcacagtgatgtgttgggcgaaactggtggggttccagag
gatgattccttaggtgtgatgtccatgaacgatgcagtaggcaatgcacatgaggatgac
tggcaactcctttga

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