Citrus x clementina (clementine): CICLE_v10019973mg
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Entry
CICLE_v10019973mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03060
Protein export
cic04141
Protein processing in endoplasmic reticulum
cic04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CICLE_v10019973mg
04141 Protein processing in endoplasmic reticulum
CICLE_v10019973mg
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
CICLE_v10019973mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cic04131
]
CICLE_v10019973mg
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cic02044
]
CICLE_v10019973mg
Membrane trafficking [BR:
cic04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
CICLE_v10019973mg
Secretion system [BR:
cic02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
CICLE_v10019973mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SecY
Plug_translocon
Motif
Other DBs
NCBI-GeneID:
18046531
NCBI-ProteinID:
XP_006442428
UniProt:
V4T618
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MGGGFRVLHLVRPFLAFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK
LLGIIIAIGEAVAYVLSGMYGSVNQLGVGNAILIIVQLCFAGIIVICLDELLQKGYGLGS
GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRNDKVRALREAFYRQ
NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL
VSNLYFISQLLYRRYSGNFFVNLLGKWKESEYSGGQYVPVGGIAYYITAPSSLADMAANP
FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHREANLQKELNRYIP
TAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtggattcagagtgctccatcttgtccggccttttcttgcattccttcctgag
gttcagagcgctgacaggaaggttcctttcagagagaaggttatctacactgtgatctct
ctcttcatattcttggtgtgcagtcagctcccgctgtatggcatacactcgacaactggt
gcggatccattctattggatgcgtgttattcttgcttcgaaccgtgggactgtgatggag
cttggtatcaccccaattgtgacatctggattggtgatgcaactacttgccgggtcaaag
atcattgaagtggacaataatgttcgcgaagatcgtgccctattaaatggtgcacagaag
ttgctgggcatcatcatagctattggtgaagcagttgcctatgttctctcaggaatgtat
ggtagtgttaaccaacttggagtagggaatgccattctaatcattgttcagctctgcttt
gctggtataattgtgatctgtttagatgaactccttcagaaaggttatggcctgggatcc
ggtatctccctattcattgcaaccaatatttgtgaaaacatcatctggaaagcatttagt
cccaccaccattaacagtggacggggagccgaatttgaaggtgctgtaattgctttattc
catctgttgataactcgaaatgacaaagttcgtgcacttcgggaagccttttaccggcag
aatcttccaaatgtgacaaaccttcttgccacagtcttgatcttcctaattgtcatttac
ttccaaggattccgtgttgttttgcctgttagatcaaagaatgcccgtgggcagcaggga
tcatacccaatcaaattgttttatacctctaacatgcccatcattttgcagtctgctctt
gtctccaacctgtatttcatttctcagttgctgtacaggagatacagtggaaactttttc
gtgaatctcttaggtaagtggaaggaatctgagtactctggtggtcaatatgtgcctgtg
ggtggcatcgcatattatatcactgctccctcgagcttagctgatatggcagccaatcct
ttccatgcacttttctatcttgtgtttatgttgtcggcctgcgcactattttcaaaaact
tggattgaagtttctggatcatctgctagagatgtcgcgaagcagctgaaggaacagcaa
atggttatgcctggacatagggaggcaaacctacagaaagagctcaaccggtacataccc
acagctgcagcatttggcggcatgtgcattggtgctctcacggtgttggcagatttcatg
ggggcaattggttcagggactgggattctgcttgccgtcaccatcatttatcagtacttc
gagactttcgagaaggagagagccagtgagcttggcttctttggcttttaa
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