Citrus x clementina (clementine): CICLE_v10020078mg
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Entry
CICLE_v10020078mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K22399
pachytene checkpoint protein 2
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10020078mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
CICLE_v10020078mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_18
AAA_14
Viral_helicase1
NACHT
NPHP3_N
Cytidylate_kin
TIP49
AAA_5
AAA_30
AAA_2
AAA_28
DUF815
ABC_tran
ATPase_2
TsaE
RNA_helicase
RuvB_N
AAA_11
AAA_24
AAA_17
AAA_33
AAA_7
nSTAND1
KAP_NTPase
Rad17
SLFN-g3_helicase
NB-ARC
IstB_IS21
AAA_RNF213_4
AAA_19
bpMoxR
AAA_3
PduV-EutP
SRPRB
Cytidylate_kin2
ResIII
Mg_chelatase
Yme1-like_N
nSTAND6
Sigma54_activat
AAA_13
Motif
Other DBs
NCBI-GeneID:
18049166
NCBI-ProteinID:
XP_006439926
UniProt:
V4TTF9
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MSTPMEITVHNSTEAEISDQDGIPEQKGVAGPPLPLLAEEKFLVSVEVCLTLSSTARIDD
VRLAVERMLEKRSLSYVDGPIPIPIDDPFLVENVQRICVCDTDEWVKNHDILLFWQVKPV
VQVFQLSEEGPCEELSGDGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAASALM
FAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF
SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN
ALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQEL
IRTGIISNFQDYDQSMLPNFSILKEKLSNPDIQEADRSQHFYKQLLEAAEACEGLSGRSL
RKLPFLAHAALANPYGCDPSKFLLTVIDTARKERSELPD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagtactcccatggaaatcaccgtacataactccacagaagccgagatctctgaccaa
gacggcatccccgagcaaaaaggcgtcgccggccctcccctgcctcttctcgccgaagaa
aaatttctcgtatccgttgaagtttgtttaacgctctcaagcacagctcgaatagacgat
gttaggttagctgttgaaagaatgcttgaaaagagaagtttaagctatgtagatgggccg
atccccatccctattgatgatccgtttcttgtcgaaaatgtacaaagaatctgtgtttgt
gatacagatgaatgggtaaagaaccatgatattcttttgttctggcaagtcaagcctgta
gttcaagtctttcagcttagtgaggaaggaccctgtgaggaacttagtggggatggccag
ctgtctagctttaatgaatggattcttcctgccaaggaatttgatggcatgtgggaaagc
ctgatttatgaatctggtctcaagcaaaggttattgcactatgcagcaagtgcattgatg
ttcgctgagaagggtgttaatcctttcctcgtgtcatggaaccgcattgtcctgttacat
ggacctccaggaactgggaaaacgtcattatgtaaagcattggctcaaaaactgtctatt
cgattcagctccagatatcctcagtgccagttggttgaagttaacgcacactctttattt
agtaaatggttctctgaaagtgggaagttggttgccaagctttttcaaaaaattcaagaa
atggtagaggaagaaaacaatctggtatttgttttgattgatgaagttgaaagtcttgct
gctgctagaaaggctgctttgtctggttcagaaccttcagattctattcgggttgtcaat
gctctactaactcagatggacaaactgaaatcatcgccgaatgtgataattttgactaca
tcgaatataactgccgccattgatattgcatttgttgatcgtgctgatatcaaagcgtat
gttggtcctccaacacttcaagcaagatacgaaattttaaggtcgtgcttgcaggaactc
atacgaacaggaatcatatcaaatttccaggattatgatcagagcatgcttccaaatttt
tctattttgaaagagaaactcagtaatcctgatattcaagaggctgacagatcacagcac
ttctataaacaattgctcgaagctgcagaggcatgcgaggggttgagcggaagatcatta
agaaaacttccattcttggcacatgcagctcttgctaacccttacggttgcgatcctagc
aagttcttgcttactgtgatagatacagctagaaaagagcgttctgagctacctgactga
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