Citrus x clementina (clementine): CICLE_v10020193mg
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Entry
CICLE_v10020193mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00040
Pentose and glucuronate interconversions
cic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CICLE_v10020193mg
Enzymes [BR:
cic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CICLE_v10020193mg
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
DUF3619
Motif
Other DBs
NCBI-GeneID:
18045929
NCBI-ProteinID:
XP_006439649
UniProt:
V4VJL1
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MAAANAGILLTLFGLASISPILKANTHDFDEVWQKRAENARRHALEAYHPNPEEVVSSFN
KHVHMMFENGSSTRRYLRGRPYTGRCAATNPIDQCWRCDRNWANNRKRLADCAQGFGRGT
IGGKNGPFYVVTNPADDDLVNPKPGTLRHAVIQERPLWITFAHDMVIRLSEELLITSDKT
IDARGSNVQIYNGAQITMQFVKNIIIHGLHIRKTKAGKGGMIRDSVSHHGFRSSSDGDGI
SMFGASHIWIDHVSMSGCQDGLIDAVMGSTAITVSNSHFTHQDHVMLLGASDSHPQDSIM
QVTVAFNHFGKQLVQRMPRVRFGFAHVVNNDYTHWLMYAIGGSQHPTILSQGNRFLASNS
HHSKEVTKRDSSPQSVWKTWNWRSEMDLMMNGAFFVESGSDVRNVNRQDVIPAKPGKFAS
QMTRFSGALNCYVNKPC
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcaaatgcaggaatattgttaactctatttggtttggcttcaatatccccg
atcttgaaggctaacactcacgatttcgatgaggtgtggcagaagcgagctgaaaatgct
agaaggcatgcccttgaagcttatcatccaaatcctgaagaagtcgttagtagtttcaat
aagcacgttcacatgatgttcgaaaatggtagtagcacaaggaggtatctgaggggacgt
ccatatacaggaagatgcgcagccacaaacccaatagatcagtgctggagatgtgacaga
aactgggctaataaccgcaagaggctagctgactgtgcccaagggtttggacgcggcacc
attggaggcaaaaacggtccgttttacgtagtaacaaacccagcagacgacgaccttgtg
aatcccaaaccaggaactttacgccatgctgtcatccaagaaaggcctctttggatcaca
tttgctcatgacatggtcattaggctcagcgaagagctactaataactagtgacaagacc
attgatgcgcgtggctctaatgttcagatctacaacggtgctcaaattacgatgcagttt
gtgaagaacatcatcatccatggccttcacattcgtaaaactaaagcaggcaagggtggc
atgattagggactcggttagtcatcatggctttcgctcgtctagtgatggtgatggaatc
tcaatgtttggagcctctcatatttggattgaccatgtgtctatgtctggttgccaagat
ggactgattgatgctgtaatgggatcaactgcgatcaccgtttccaattcccacttcaca
caccaggatcatgtgatgttgttaggcgcaagtgatagccacccgcaagattcaatcatg
caagttactgttgctttcaatcactttggtaaacaattagtgcagagaatgccccgagtc
cgattcggatttgcgcatgttgtcaacaatgactacactcattggctaatgtatgctata
ggcggtagccagcatcccaccatccttagccagggtaaccgattccttgcctctaacagt
caccattctaaagaggtgaccaagagggactcttccccgcaaagtgtttggaaaacatgg
aattggaggtcagaaatggatttgatgatgaatggagccttctttgttgaatcagggagc
gacgtcagaaatgtgaacagacaggatgtgatacctgcgaagcctgggaaatttgcgtcc
cagatgacacgcttttcaggtgctcttaattgctatgtgaataagccatgttaa
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