Citrus x clementina (clementine): CICLE_v10020455mg
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Entry
CICLE_v10020455mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K18735
protein SMG9
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10020455mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
CICLE_v10020455mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NB-ARC
MMR_HSR1
MeaB
URGCP_GTPase
ABC_tran
AAA_18
AAA_16
RsgA_GTPase
GBP
Ploopntkinase3
FeoB_N
AAA_17
Motif
Other DBs
NCBI-GeneID:
18050150
NCBI-ProteinID:
XP_006443193
UniProt:
V4T815
LinkDB
All DBs
Position
Unknown
AA seq
289 aa
AA seq
DB search
MAGSSSSNPSSGPKILLAKPGLVSGGAVGGKFGRGEDETVPHVHPHPLRSRLPSLNLLSD
SWDFHIDRFLPFLSENTEFTVVGVIGVPGVGKSTIMNELYGFDATSPGMLPPFPTLSEDT
RAQAKHCTSGIEPRISAQRLLLLDTQPVFSSSVLAEIMRPDGSSTIPVLSGESLSAELAL
ELMSIQLGVLLASICHVLLVVSDGVHDNKMWRLMSMVDLLKHGIPDPSSLTASNSQSSNL
GSEKDKKDKANEGEEYMATPVFVHAKILLSRQLVPFVFFSLFLGKLLLV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggctggttcatcatcatcaaatccgtcgtcgggtccgaaaatcctactagcgaagcct
ggactggtgagcggtggagcggttggcggtaaatttgggcgtggggaagacgaaacggtg
ccgcatgttcacccgcatccgctccgatctcgtcttccgtctctcaacttgttgtccgat
tcctgggactttcacatcgatcgctttctaccgtttttgagtgagaatacggagtttaca
gtggtgggagtgattggtgttccgggtgtgggcaagtccaccattatgaacgagctttat
ggctttgatgctacctcacctggaatgcttcctcctttccctactctatctgaagatacc
agagctcaggctaagcattgcacttccggaattgaaccaagaatttcagctcaacgcctt
ttacttctcgacactcagcctgttttcagttcttctgttttagctgaaattatgagacct
gatggctcgtccacgattccagttcttagtggtgaatctttatccgccgagttggctctt
gagctcatgagtattcagcttggtgttctcttggcttctatttgtcacgttttgctagtg
gtatctgatggagtccatgacaataaaatgtggcgcttgatgtcgatggttgacttgttg
aagcatggcatacctgatccatcttctttgactgcttccaactcacagagctcaaatttg
gggtcagaaaaagataagaaagataaagcaaacgagggtgaagagtatatggctactcca
gtttttgtgcatgcaaagattctgttgagcagacaactggtcccctttgtgtttttctcc
ctttttttgggaaaacttcttctagtttaa
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