Citrus x clementina (clementine): CICLE_v10020902mg
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Entry
CICLE_v10020902mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cic04131
]
CICLE_v10020902mg
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10020902mg
Enzymes [BR:
cic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CICLE_v10020902mg
Membrane trafficking [BR:
cic04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
CICLE_v10020902mg
Ubiquitin system [BR:
cic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
CICLE_v10020902mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
Zf_IFT144_1st
Anti-TRAP
zf-HC5HC2H_2
zf-HC5HC2H
DUF7573
zf-RING_16
HypA
Zn_ribbon_8
zf-C2H2_DHX34
Motif
Other DBs
NCBI-GeneID:
18047608
NCBI-ProteinID:
XP_006441411
UniProt:
V4TXR0
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MSFSGGNFGGAAAAAPPQQEPQMYFCHQCNRTVRVTPSPSSDLVCPSCNGGFIEELETPN
PSVNPNPNPMDAFLLDDLSTLLGMGPTRSFTDPSEFNPFVFLQNYLQNLRANGASIQFVV
ENNSNVDPAAGGAGAAFRLPANLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEAL
PSIKINEAMMSSDSSQCAVCKDSFELNEEARQMPCKHIYHPDCIMPWLELHNSCPVCRYE
LPTDDPDYEQRRNGNGDNNSNNNNSMNQSFNLGFGFGGGGSGGNDGESGGNAETPRTVER
RLRISLPWPFNAFASRAETSGNSGSGSGGTNDGDSTSGTRGSEPRQEDLD
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctccggcggaaacttcggaggcgcggccgccgcagcaccaccacaacaagaa
ccgcagatgtacttctgccaccagtgcaatcgtacggtcagggttactccgtccccgtct
tccgatctcgtgtgcccctcttgcaatggtggcttcatcgaagaactcgaaacccctaat
cctagcgttaaccctaaccccaatccgatggacgcctttttattagacgatctctcaacc
ctcttaggcatgggccctacccgctccttcactgacccctccgaattcaatcctttcgtc
ttccttcaaaactatcttcaaaacctaagagcgaacggcgccagcatccaattcgtcgtc
gagaacaactccaacgtcgacccggcggccggtggcgccggggctgcgtttcgtctcccg
gcgaatcttggagactacttcatcggtccgggcctcgagcagttgatccaacagctggct
gagaatgatccgaaccggtacgggacaccgccggcttcgaaatctgccatagaggccctc
ccgagtatcaagatcaacgaggcaatgatgagttcggattcttctcagtgtgctgtgtgt
aaggatagctttgaattgaatgaagaagctagacagatgccttgtaagcatatatatcat
ccggattgtattatgccttggcttgaattgcataattcctgtcctgtttgtcgttatgaa
ttgccaactgatgatcctgattatgaacaaaggcggaatgggaatggggataataatagt
aataataacaatagtatgaatcagagtttcaatctggggtttggttttggtggtggtggg
tcgggtggtaatgatggtgagagtggagggaatgctgagactccgaggaccgtggaacgt
aggcttagaatctcattgccgtggcctttcaatgcattcgcctctcgtgcggagactagt
ggaaacagtggcagtgggagtggcggcaccaatgatggagattccacctcaggaaccagg
ggatcagagcccagacaagaagatcttgattaa
DBGET
integrated database retrieval system
