Citrus x clementina (clementine): CICLE_v10020998mg
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Entry
CICLE_v10020998mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CICLE_v10020998mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10020998mg
Enzymes [BR:
cic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CICLE_v10020998mg
Ubiquitin system [BR:
cic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
CICLE_v10020998mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
Motif
Other DBs
NCBI-GeneID:
18047574
NCBI-ProteinID:
XP_006441088
UniProt:
V4T2B4
LinkDB
All DBs
Position
Unknown
AA seq
339 aa
AA seq
DB search
MELDSIECVSSMDGLMDEDEISHHHHPPLLHHHQFASSKPHNNAINNNNAANTNGINGIV
GPTAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIR
CLALEKVAESLELPCKYYHLGCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPY
LVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAYQLGTA
PVYMAFLRFMGDETEARSYSYSLEVGGNGRKLSWEGTPRSIRDCHRKVRDSHDGLIIQRN
MALFFSGGDRKELKLRVTGRIWKEQQNPDAGVCIPNLCS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggaattggatagtattgagtgtgtgtcatccatggatgggttgatggatgaggatgag
atcagccatcatcaccatcctcctcttcttcatcaccatcaatttgcatcatcaaagcct
cacaataatgccatcaacaacaataatgcagcaaacactaatggcatcaatggtattgtg
ggtcccacggcgatcgcccctgccaccagtgttcatgagttgcttgaatgccctgtttgc
accaattctatgtacccaccaatccatcagtgccacaatggacacacactttgttccact
tgtaaaacaagggtacacaaccggtgccccacttgtagacaggagctcggagatattagg
tgtttagcattggagaaggtggctgaatcacttgaactgccatgcaagtattaccacctg
ggttgcccagagatatttccatattacagcaaacttaaacatgaggttatgtgcaccttc
agaccgtataactgcccatatgctgggtcagattgctctgtcgttggggacatcccatac
ttggttgcccatttgagggacgatcacaaagtagatatgcacacaggatgcacattcaat
catcgctatgtgaagtccaatccccgtgaagtagagaatgctacatggatgcttacagtt
ttccattgttttggtcaatacttctgccttcatttcgaagcataccagcttgggacagct
cctgtttacatggcattcctccgttttatgggtgatgagactgaagctcgaagctatagc
tatagcctagaggttgggggaaatggtaggaagctcagttgggagggaacaccccgaagc
atccgggattgccaccggaaggtcagagatagccacgatggtcttatcatccaacgaaac
atggcgcttttcttctctggtggggacaggaaggagctgaagctaagagttactgggagg
atatggaaggaacaacagaatccagatgctggcgtgtgcataccaaacctatgtagctga
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