Citrus x clementina (clementine): CICLE_v10021080mg
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Entry
CICLE_v10021080mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03030
DNA replication
cic03410
Base excision repair
cic03420
Nucleotide excision repair
cic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CICLE_v10021080mg
03410 Base excision repair
CICLE_v10021080mg
03420 Nucleotide excision repair
CICLE_v10021080mg
03430 Mismatch repair
CICLE_v10021080mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cic03032
]
CICLE_v10021080mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10021080mg
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10021080mg
DNA replication proteins [BR:
cic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CICLE_v10021080mg
DNA Replication Termination Factors
ELG1-RFC complex
CICLE_v10021080mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CICLE_v10021080mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CICLE_v10021080mg
Check point factors
HRAD17(Rad24)-RFC complex
CICLE_v10021080mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
AAA_lid_RFC1
nSTAND_NTPase5
AAA_16
Viral_helicase1
RCF1-5-like_lid
Mg_chelatase
Rad17
AAA_5
nSTAND3
AAA_11
AAA_assoc_2
AAA_25
AAA_19
AAA_28
DNAX_ATPase_lid
AAA_3
RuvB_N
ABC_tran
AAA_24
AAA_7
MeaB
AAA_18
AAA_30
IstB_IS21
bpMoxR
RNA_helicase
NTPase_1
DO-GTPase1
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
18047527
NCBI-ProteinID:
XP_006440559
UniProt:
V4VLY3
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MASSSSSSSAYDIPWVEKYRPTKVCDIVGNLDAVARLGIIARDGNMPNLILAGPPGTGKT
TSILALAHELLGPNYREAVMELNASDDRGIDVVRNKIKMFAQKKVTLPPGKHKVVVLDEA
DSMTAGAQQALRRTMEIYSNSTRFALACNISSKIIEPIQSRCAIVRFSRLSDEEILSRLM
VVVQEEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHV
KNMVRNVLEGKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYEMAEHLKLEFMKEAGFA
HMRICDGVGSYLQLCGLLAKLSIVRETAKAV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtcttcatcgagcagcagcgcctacgatatcccgtgggttgagaagtaccgg
ccgaccaaggtatgcgacatcgtcggcaacttagatgccgtcgctaggctgggtatcatc
gctcgcgacggaaacatgccaaatctaatcctggctggtccacctggaaccggtaaaaca
acaagtattttggctcttgcacatgagctgctgggaccaaattatagggaggctgtaatg
gagcttaatgcatcggatgacaggggtatagatgttgtcagaaacaaaattaagatgttt
gcccagaaaaaagtaacgctgcctccaggaaaacacaaagtagtagttcttgatgaggct
gatagcatgacagctggtgcacaacaagcactgaggcgtacaatggaaatttattcaaac
tccactcggtttgctcttgcctgcaatatatcttctaaaattatcgagcctattcagagt
agatgtgccattgttcgattttcgagattatctgacgaagagatacttagccgcctcatg
gtggtggttcaagaagaaaaggttccttatgtacctgaaggtcttgaagcaattattttc
accgctgacggtgatatgaggcaggcattgaacaacttgcaagctacatacagtggtttt
cggtttgttaaccaagaaaatgttttcaaggtctgtgaccagcctcatccattgcatgtg
aagaatatggtccgcaatgtgcttgaggggaaatttgatgatgcttgttctggtctaaag
cagctctatgatttgggttactcccctaccgatattatcacaacccttttccgaatcatt
aagaattacgaaatggctgagcacctgaaattggaatttatgaaggaagctgggtttgcc
catatgagaatctgtgatggagttggctcatatctacagctatgtggtctcctagctaag
ctttctatagttcgtgaaacagctaaagcagtataa
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integrated database retrieval system
