Citrus x clementina (clementine): CICLE_v10021133mg
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Entry
CICLE_v10021133mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03679
exosome complex component RRP4
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CICLE_v10021133mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10021133mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CICLE_v10021133mg
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
CICLE_v10021133mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Mem_trans
Motif
Other DBs
NCBI-GeneID:
18046996
NCBI-ProteinID:
XP_006444154
UniProt:
V4VVR2
LinkDB
All DBs
Position
Unknown
AA seq
327 aa
AA seq
DB search
MRNLQLSFNQTQKVRLEKALERLESLSSKSNPNSCVTVGDTIPVYEDGILKGHGTSDQKG
ELAATVCGVVERINKLIYVRALRARYKPETGDIVIGRVIEVVPKRWKLEINFTQDAILML
SSMNLPDGIQRRRTAVDELNMRSIFTENDLVCAEVRSSQGDGSLQLQARNQKYGKLERGQ
LLTVDPYLVKRRKQHFHHLEEYGIDLIIGCNGYIWIGEHVEARDKMVVDQGSNSEQLIAK
CDKNSMDLDEQDGTCTPREARQNICRIANAIRVLSRLGFNITVEVILETVNLSNSLNLDI
HDMLGSEFYVLVAESEAERRSLSKRKR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacttacagttatcgttcaatcaaacgcaaaaggtgagacttgaaaaagctctc
gaaaggcttgagtctttatcttcaaagtcaaaccctaactcctgcgtcaccgtcggcgac
accatccctgtttacgaagatggcatcctcaagggacacggaacctcggaccagaagggc
gagcttgctgcgacagtctgtggtgttgtcgaacgcatcaacaagttgatctacgtacgc
gctttacgcgccagatacaagccggagacgggagacattgtcataggacgtgtcatagag
gttgttccgaagagatggaaattggaaataaacttcacacaagatgccattttgatgctt
tcttcaatgaacttgcctgatggaattcagaggcggcgaacggccgtggatgagctcaat
atgcgcagtatttttacagaaaatgacttagtctgtgctgaagttcgtagttcacagggt
gatggcagtttacaacttcaagcaagaaatcagaagtatggcaagctcgagaggggtcaa
ctgctcacagttgatccttatctggtgaagagacggaaacaacattttcaccacctggaa
gagtatggaattgacttgataattggatgtaatggatacatctggattggtgagcatgtt
gaagccagagacaagatggtggtggatcaaggaagcaattctgaacaactgatcgctaaa
tgtgataaaaattccatggatcttgatgaacaagatggaacttgcactccacgagaagcg
agacagaacatttgcagaattgcaaatgctattcgcgtcttgtctagactaggcttcaat
ataacagtagaagtgatcctggaaacagttaacctgagcaactcactgaatcttgatata
cacgacatgcttggatcagagttctatgttctggttgcagagagtgaagctgaaaggcga
agcctgagcaaaaggaagcgatga
DBGET
integrated database retrieval system
