Citrus x clementina (clementine): CICLE_v10021159mg
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Entry
CICLE_v10021159mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CICLE_v10021159mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10021159mg
Enzymes [BR:
cic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CICLE_v10021159mg
Ubiquitin system [BR:
cic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
CICLE_v10021159mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
Motif
Other DBs
NCBI-GeneID:
18046202
NCBI-ProteinID:
XP_006444835
UniProt:
V4U1Z4
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
MELHSIECVPSSDLTDEDEIHHHRPHQFPSISKPHNNCNNNNTSLASVINPGTTSVHELL
ECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPC
KYMSLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSIVGDIPFLVAHLRDDHKVDMHS
GCTFNHRYVKSNPHEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETE
ARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKL
RVTGRIWKEQQSPEGGACIPNLCS
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcatagcattgaatgtgtgccatcctcagatttgactgatgaggatgagatc
catcaccatcgcccccatcagtttccttctatttcaaagcctcacaataactgcaataat
aataacactagtctcgcttctgttattaatcctggcaccaccagtgtccatgaacttctt
gaatgtccagtttgtactaattcaatgtatcctcctattcatcagtgccacaatgggcat
acgctctgttcaacctgtaaaacaagagtacataatcggtgccccacttgtaggcaggag
cttggtgatataaggtgtctagcattagagaaggtggctgaatcacttgaactaccctgc
aaatacatgtcgcttggatgcccagagatcttcccttattacagcaaacttaagcatgag
gctatatgtaacttcagaccttacaattgtccatatgctggatcagagtgctccatagtt
ggtgatattcccttccttgttgctcatctgagggatgatcacaaagtagatatgcattct
gggtgcactttcaaccatcgctatgtcaagtctaatcctcatgaagtagaaaatgccaca
tggatgttaactgttttccactgttttggccagtacttctgcctacattttgaagctttc
cagctggggatggctccagtgtacatggcattcctccgattcatgggtgatgagacagaa
gccaggaattacacctacagtctagaggttggaggaaatggacggaagcttacttgggaa
ggcaccccacggagcatcagagacagtcacaagaaggttagagacagtcatgatggtcta
attatacagcgtaatatggctctttttttctctggaggggaccggaaagagttgaagctg
cgagttaccggacggatatggaaagaacagcagagcccagaaggcggcgcctgcataccc
aacctctgtagttag
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