Citrus x clementina (clementine): CICLE_v10021646mg
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Entry
CICLE_v10021646mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CICLE_v10021646mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cic03041
]
CICLE_v10021646mg
Spliceosome [BR:
cic03041
]
Common components
Common spliceosomal components
SR proteins
CICLE_v10021646mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Transformer
RRM_7
RRM_occluded
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
18050225
NCBI-ProteinID:
XP_006441229
UniProt:
V4TX17
LinkDB
All DBs
Position
Unknown
AA seq
271 aa
AA seq
DB search
MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED
AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGAGAGAGAGAGRFGI
SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAI
RKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRSV
SRSMSASPVKSSRARSRSRSVSPDKVRSGSG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgtttttctcgtacaatctatgttggcaacctgccctctgatataagagaa
tatgaagttgaggatctcttttacaagtatggccgtatattggatattgaattaaagatc
ccccctcgcccgccatgttattgttttgttgagtttgagaatgctcgtgatgccgaagat
gctattagaggtcgtgatggctataactttgatggttgtcgtttaagggttgagctcgcc
catggtggtagtggtagaggtccatcatcaagtgatcgtcgtggtggctatggtggtggt
ggtgctggtggtgctggtgctggtgctggtgctggtgctggtgctggtcgttttggcatc
tcacgccattctgaatatcgagttattgtccgcgggcttccttcttcagcttcctggcag
gatttaaaggatcatatgcgaaaagcaggcgatgtttgttttgctgaagtttcccgtgat
agtgaggggacttatggggtcgttgattatactaatcctgaagacatgaaatatgcaatt
cggaaacttgatgacactgaatttagaaatccttgggcaagagggcgcataacggtgaaa
agatacgatcgtagtccatcgagaagccgcagtagaagccgaagtagaagccgaagcaga
agcagaattgtgcgaagaaatagaagtaaatcattagagcgttctgtttccagatcagtg
tcaagatctatgtctgcttctcctgtcaagtcgtccagggcaagatcaaggtcgcggtca
gtatcaccagacaaggtgcgttctggaagtggctga
DBGET
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