Citrus x clementina (clementine): CICLE_v10022342mg
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Entry
CICLE_v10022342mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CICLE_v10022342mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10022342mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CICLE_v10022342mg
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
CICLE_v10022342mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
ECR1_N_2
RRP4_S1
CHASE5
Motif
Other DBs
NCBI-GeneID:
18046581
NCBI-ProteinID:
XP_006443276
UniProt:
V4U2X3
LinkDB
All DBs
Position
Unknown
AA seq
198 aa
AA seq
DB search
MVVKEEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRA
TVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRAT
EIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGGTMVPISWTEM
QCPLTGQTEQRKVAKVGT
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggtagtaaaagaagaagagatggtattggtaacaccaggagaggtgttggggaaggca
acagaagtgaaagcagggaagggagcttacgtggccaaacacaacggtctcgtctacgct
tctctcactggtctcctccgcactctatcccctcctcccgactcccccgaccagagagca
actgtggaagtaactggtcacaaggcccatggccctgttccagagcctggttctgttgtc
attgcccgagttacgaaagtgatgactaggatggcttcagctgatattatgtgtgttggt
gccaagtctgtgagagagaaattttcgggcataatcaggcagcaagatgttagagcaact
gagattgacaaagtggatatgcacttgtcatttcggcctggggacattgttagagcttca
gtgctgtcccttggagatgcacgggcatattttctttccactgcaaaaaatgatctgggt
gttgtgtcagcagagagtacagctggtggaaccatggttccaataagttggaccgagatg
caatgcccattaaccggccaaacagagcaaagaaaggttgccaaggttgggacttga
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integrated database retrieval system
