KEGG   Citrus x clementina (clementine): CICLE_v10022685mg
Entry
CICLE_v10022685mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03018  RNA degradation
cic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CICLE_v10022685mg
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CICLE_v10022685mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cic03019]
    CICLE_v10022685mg
   03041 Spliceosome [BR:cic03041]
    CICLE_v10022685mg
Messenger RNA biogenesis [BR:cic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CICLE_v10022685mg
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CICLE_v10022685mg
Spliceosome [BR:cic03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    CICLE_v10022685mg
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 18048616
NCBI-ProteinID: XP_006444300
UniProt: V4U0H0
LinkDB
Position
Unknown
AA seq 150 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGAGGRQAKGVGRGLDD
GSAKGVGGGRGRGGSGGKPGGSRGGGRGRG
NT seq 453 nt   +upstreamnt  +downstreamnt
atgcttcccctttctctacttaaaactgcacaaggccatcctatgttagtagaactgaaa
aatggggagacttacaatggacacttggtcaattgtgatacttggatgaacatccatctt
cgtgaagtcatctgtacatctaaggatggagatagattttggagaatgcctgaatgctat
atccgggggaacacaattaagtatcttcgagttcctgatgaggtgattgacaaagttcag
gaagaaaccaagagtcgttcagatcgtaagccacctggggttggtcgtggcagaggaaga
ggtagagaggatggtgctggtggaaggcaagcaaaaggcgttgggcgtggtctggatgat
ggtagtgctaagggagtgggtggaggccgaggcaggggtgggtctggtggaaagcctggt
ggtagcagaggtggagggcgaggtcgaggatag

DBGET integrated database retrieval system