KEGG   Citrus x clementina (clementine): CICLE_v10022723mg
Entry
CICLE_v10022723mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03020  RNA polymerase
cic03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CICLE_v10022723mg
  09124 Replication and repair
   03420 Nucleotide excision repair
    CICLE_v10022723mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cic03021]
    CICLE_v10022723mg
   03400 DNA repair and recombination proteins [BR:cic03400]
    CICLE_v10022723mg
Transcription machinery [BR:cic03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CICLE_v10022723mg
  RNA polymerase III system
   RNA polymerase III
     CICLE_v10022723mg
  RNA polymerase I system
   RNA polymerase I
     CICLE_v10022723mg
DNA repair and recombination proteins [BR:cic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CICLE_v10022723mg
SSDB
Motif
Pfam: RNA_pol_Rpb8 O-ag_pol_Wzy
Other DBs
NCBI-GeneID: 18048958
NCBI-ProteinID: XP_006442881
UniProt: V4U1W1
LinkDB
Position
Unknown
AA seq 146 aa
MSNIVLFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMA
LAHTLNLDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLL
MMLKGDPSYVSHFELDQRLFLLMRKL
NT seq 441 nt   +upstreamnt  +downstreamnt
atgtcgaatatagtactttttgaggatatttttgtggttgagaagatagacccggatggc
aagaagtttgacaaggtttcccgcattgaagcacatagtcagaactgtgacatgtacatg
ctactggatgtgaactcggagctatatcctatgcgtgttggtgataaattcacaatggct
ttggctcacacgttaaatttggatggaacaccagatactggctattatactccaggtgcg
agaaagacacttgctgacaagtatgaatacattatgcatgggaagctattcaagattgga
gatgaaggttctggaaaatcacttaaagcggagatatatgtttcatatggtgggcttcta
atgatgctcaagggggatccgtcttatgtctctcacttcgagcttgatcaaaggctgttt
ctcctgatgaggaagttgtaa

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