Citrus x clementina (clementine): CICLE_v10023308mg
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Entry
CICLE_v10023308mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10023308mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
90S particles
Other 90S particles
CICLE_v10023308mg
Pre-60S particles
Other pre-60S particles
CICLE_v10023308mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
MMS19_N
TPR_TTI1_C
Motif
Other DBs
NCBI-GeneID:
18046411
NCBI-ProteinID:
XP_006444518
UniProt:
V4TBS7
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MDAFEMEDGTAFSIGNDVDLCSSILSRFSSSAQEEHQHLCAAIGAMSQELKDQNLPLTPI
SYFGATCSSLDRLLSSPDPDRSSHIIGSLSTILSLLLPKISVAVLKKKGDFLTDLVVRVV
RLSSVTAGAVASGLTCLSRLLTGRGRVNWSDVSQLYGVVLAFMTDSRLKVRRQSHLCVRE
ILLSLQGTLVLAPASEAITNMFEKFLLLAGGSNTSADEKPKGAQEVLYVLDGLKECLPLM
STKYTAVILKYFKTLLELRQPLVTRRVTDALNVICLHPTLEVSAEALLDLLCSLGLSVST
NETSADAMTFTAHLLNVGMIKIYSINREICSTKLPIVFNALKDILASEHEEAIFAATEAL
KNLINACIDESLIKQGVDQITNVNSDARKSGPTVIEKICATVESLLDYHYSAVWDMAFQI
VSTMFDKLGTYSSYFMRGALKNLADMQNLPDEDFPYRKQLHECVGSAVGSMGPETFLCLL
PLKLEASDLSEVNVWLFPILKQYIIGARLNFFMEKLLGMAKLIGQKSQKFELEGRVFSSR
SADALVYSLWSLLPSFCNYPVDTAESFMDLAGVLCSALHEENDIRGIICSSLQNLIQQNK
KTLEGKNDLSNVVISTASQRAMAHYTTKVATDNLNVLKSSARELLSILSRIFLESAKDEG
GCLQSTIGDFASIADKEIVTRLFKRTMHRLLEATQEAGKTKSTRKSNSMQIDDSSNESSP
DFMRARLFDLAVSLLPGLNAKEIDVLFVAIKPALQDDEGLIQKKAYKVLSTILRKCDGFL
SSRLEELLGLMIEVLPSCHFSAKRHRLDCLYFIIAHVSKDDSEQRRSYILSSFLTEIILA
LKEANKRTRNRAYDVLVQIGRAFGDEENGGGKENLYQFFNMVAGGLAGESPHMISAAVKG
LARLAYEFSDLVSNVYKLLPSTFLLLQRKNREIIKANLGLLKVLVAKSHAEGLQIHLASM
VEGLLKWQDDTKNQFKSKIKLLLEMLVKKCGLDAVKAVMPEEHMKLLKNIRKIKERKERK
LATKTEDTKSHFSKTTTSRLSRWNHTKIFSDFGDEGSEGSDAEYMDVGTVSGQRSKASSQ
LKSKVSTLRLKKKRKADKILPEDLFDQLEDEPLDLLDRQKTRSALRSSEHLKQKTESDDE
PEIDSEGRLIIHEGRKPKKVKPSNPDLDGRSEAGSMMSRPSSRKTQKRRKTSESGWAYTG
SEYASKKASGDVKRKGKLEPYAYWPMDRKLMSRRPEHRAAARKGMASVVKLTKKLEGKSA
SSALSMKFTKSKKGRR
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttcgaaatggaggacggcaccgcattctccatcggaaacgacgtcgattta
tgttcgtcaatcctctcccgcttctcgagctccgcgcaagaggagcaccagcacctctgc
gccgcaatcggcgctatgtcgcaagaactcaaggatcagaacctccctctcactcccatc
tcttacttcggcgccacgtgttcctctttggaccgcctcctctcctctccggaccccgac
cgttcctcccacattatcggctccctctccacgattctctctctcctccttcctaaaatc
tcggtggcggtattgaagaagaagggagatttcttgacggaccttgtagtgcgtgttgtg
aggttaagttccgtcacggctggtgccgtcgcttcgggcttgacatgcttgtcgcgtttg
ttgactggtagggggagagtcaattggtccgacgtgtcacagttgtacggagtcgttctg
gctttcatgactgattcgcgtctgaaggtgagaaggcagtcacatctgtgtgtccgtgaa
atcctactgagtttgcaaggaacacttgttttagcaccagcaagtgaagcaatcacaaac
atgtttgaaaagtttcttctgcttgctggtggctcaaacacgagtgccgatgaaaaacct
aaaggagctcaggaggttctttatgtgttggatggtcttaaagagtgtcttccccttatg
tcaacgaaatataccgctgtgatcctgaagtacttcaaaactctcctcgagcttcggcag
ccacttgttactaggcgtgtaactgatgctctgaatgtgatttgtctccacccaactcta
gaggtttcagctgaagcactgcttgacctgttatgttcattgggtctttcagtctccaca
aatgagacatctgcagatgcaatgactttcactgcccacttgctgaatgttggaatgatc
aaaatatattcaattaatcgggagatttgctcaactaaactccccattgtattcaatgcc
ctcaaagatattttggcatctgagcacgaggaggctatatttgcagccacggaggcattg
aagaatcttataaatgcttgtattgatgaaagcttgataaaacaaggagtagatcagatt
acgaatgtaaactctgatgctagaaagtccggcccaactgtaattgaaaaaatctgtgca
actgttgaaagcttgcttgattatcactacagtgcagtttgggacatggcatttcaaatt
gtttcaactatgtttgacaaactagggacttattcttcatattttatgaggggagccctt
aagaacttggctgacatgcagaatttgccagatgaagattttccttacagaaaacagctg
catgagtgtgttggatcagctgttggttcaatgggtcctgaaacatttttatgccttctt
cctctcaagctggaggctagtgacctttctgaggtaaatgtttggctctttccaatcttg
aagcagtacattattggtgctcgtttgaatttctttatggagaaacttttgggaatggct
aaactgatagggcagaaatctcagaagtttgagctagaaggccgtgttttctcatctagg
agtgctgatgcccttgtttactctttgtggtccttgttgccttcattttgcaactaccct
gtggatacagccgaaagtttcatggatctagcaggagttttatgcagtgctcttcatgaa
gaaaatgatattcgtggaataatctgctccagtctgcagaatttaattcaacaaaataaa
aagactcttgaagggaaaaatgatttatctaatgttgtaataagtacagctagccagcga
gctatggcccattataccacaaaggttgcaactgataatttgaatgtgctgaaatcatct
gctcgtgaattattgtctattttgtctcgaatttttcttgagtctgctaaagatgaggga
ggttgtttgcagtcaactattggcgactttgcttcaatagctgataaagaaatagttaca
aggttattcaaaaggactatgcatcggcttttggaggccacccaagaggctggaaaaaca
aaaagtactagaaaatctaattctatgcagattgatgattcatcaaatgaaagctcgcct
gattttatgagggctcgattgtttgacctagcagtttcacttttgccgggtttgaatgct
aaagagattgatgtcttatttgttgcaataaaacctgcattacaggatgatgaagggttg
atacaaaagaaagcatacaaagttctttcaactattctcaggaaatgtgatggatttctt
tcatcaaggcttgaggagttgcttggtcttatgattgaagtgttgccttcttgccatttt
tctgccaagcgccacagacttgattgtttgtactttataatagctcatgtatccaaggat
gattctgagcaaaggagaagctacattcttagttcttttctgacagagataatacttgct
ctgaaagaggccaataaaagaacaagaaatagagcttatgatgttcttgtccaaattggt
cgtgcttttggggatgaagagaatggcggagggaaagaaaacttgtatcaattttttaac
atggtggctggaggcttggctggagaatctcctcatatgattagtgctgcagtgaagggc
ttagctcgtttagcttatgagttttctgatctcgtttctaatgtgtacaagttgcttcct
tcaacatttctactccttcagaggaagaacagagaaattattaaagccaacttaggtttg
ttgaaagttttggtagccaaatcacatgctgaagggctgcaaatacacttggcaagtatg
gtggaaggcttgctgaagtggcaagatgataccaaaaaccaatttaaatccaagatcaag
cttctcttggaaatgcttgtcaagaaatgtggtttagatgctgttaaggctgtgatgccg
gaagaacacatgaaacttcttaaaaacataagaaagatcaaggaacggaaagaaagaaaa
cttgctaccaaaactgaggataccaaatctcacttttctaaaacaactacttcaaggctt
agcagatggaatcatacgaaaatattttctgattttggtgatgaaggctctgagggcagt
gatgcagaatatatggatgtggggacagtatctggtcaacggagcaaggcttcctctcag
ttaaaatccaaagtatcaacattacggttaaagaaaaagcgcaaggcagataagatcttg
cctgaagacttgtttgaccagttagaagatgagccacttgacctgcttgataggcagaaa
acaaggtcagctcttagatcatccgagcatctgaaacagaagacagaatcagatgatgag
ccagagattgactccgaagggcgcctgataattcatgagggaaggaaaccaaagaaggtg
aagccttccaaccctgatttggatggaaggagtgaagcaggtagtatgatgtccaggccc
tcttcaaggaaaacccagaagcgtagaaaaacatctgaatctggatgggcatacactgga
agtgagtatgctagcaagaaggcatctggggatgtaaagaggaagggcaagcttgaacca
tatgcttattggcctatggatcgaaaactgatgagccgtagacccgagcatcgggcagct
gcaagaaaaggtatggcaagtgtggtaaagctgaccaaaaaacttgaaggaaagagtgcc
tcgagcgcactttcaatgaagtttacaaaatcaaaaaaaggccgcaggtag
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integrated database retrieval system
