Citrus x clementina (clementine): CICLE_v10023493mg
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Entry
CICLE_v10023493mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00040
Pentose and glucuronate interconversions
cic01100
Metabolic pathways
Module
cic_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CICLE_v10023493mg
Enzymes [BR:
cic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
CICLE_v10023493mg
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
18046014
NCBI-ProteinID:
XP_006442242
UniProt:
V4TPY2
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MPSSRVLLFLMFLGFAVVTKVQGGIKIFDVTKYGAIGDGRIDNTKAFLRAWNDACKWDGN
SGVLIPRGTFLLGTVTFTGPCKKSTAFQIKGVIRAPSDLKRMSNPDQWIGFRYVDRLLVN
GRGTVDGQGASAWSFNSCAEDPNCPSLPISMVFNFVTNSRISGITSVNSKNAHISLYGCH
KVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSIGTGDDCIALLSGSTNINVTDVSCG
PGHGISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASGFTFENIFMS
NVENPIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSSTKVAVNFQCSKTFPCENIV
LQDIYLVHNGRDGAATSSCNFVDGDSYGNQKPPSCL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttctagggttttattatttctcatgttcttaggctttgcagtggttacaaaa
gttcaaggtggaatcaagatttttgatgtaacaaaatatggtgcaattggagatggccgc
attgataataccaaggcatttttgagagcatggaatgatgcatgtaagtgggatggaaac
agtggggttttgatcccaagaggaacatttttgttgggcacagtcacatttacaggacca
tgcaagaaatcaacggcattccaaatcaaaggggttatcagggctcctagtgatctcaaa
agaatgagtaatcctgatcaatggatcggcttccgatacgtcgatcggctgctggtgaat
ggccgtggcaccgtagacggccaaggagcctccgcttggtctttcaactcatgtgctgag
gatcccaactgccctagccttcccatttctatggtattcaattttgtgaccaattcaaga
attagtggcattacctcagtgaacagcaagaacgcacatatctcgttatacggatgccac
aaggttagcatcgacaacattaaaataactgccccataccaaagccctaacactgatggc
attaaaattggagactcaaaaggcatcaaaatcacccactcttccatcggcaccggcgac
gactgcatagccctactctccggcagcacgaacatcaacgtcaccgacgtgagttgcggc
cccggccacggcatcagcgtaggcagcctaggcaggtatgcgaatgagagaaacgtgcat
ggcttggctgtgagaaattgcacgtttaggggcacaacaaatggtgtgaggataaaaaca
tgggcgtctccgcaggctaacgtggcttcgggctttacattcgaaaatattttcatgagc
aatgtcgaaaatcctatagtcattgatcaaatgtactgcccacatggctcatgcaatcaa
aagattacatcgaatgtgcagatcaaagatgtgacgtacaggaacatatggggtacttca
agtacaaaagtggccgtaaattttcaatgcagcaaaacgtttccatgcgaaaatattgtg
ttacaagatatctatttggtgcataatggacgtgatggggcggcaacttcttcttgcaat
tttgtcgatggagattcttatggcaatcaaaaaccgccctcttgtttgtag
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