Citrus x clementina (clementine): CICLE_v10023697mg
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Entry
CICLE_v10023697mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CICLE_v10023697mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10023697mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
CICLE_v10023697mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
18048134
NCBI-ProteinID:
XP_006440142
UniProt:
V4TJ20
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MKRQPIAKRTRSQTNRMIEEKYKKLKENKGQEKYGAESSSSKVNESSSSKDDECVKGFEM
DNVSDKEEKEEGTRSKQVDDDCGGFLSESESDNDGSDPLRPIIVDCCPEEDLDLDAENSS
LGSKTTDEYVINDDYVDDDGDDDGEKEEEEERETDDESLLEARTKNKGKLKKSTKGKHNR
ELKHDHVERIILKSILNTEETPSEDYPSSSREVLRDEMSQSFNDDEESTPSEKSECDDGL
GYLWAEMDFARKVSELHSTNSSILAENEAASSNEVETAKTRCQRGDHDLILNEEYGLYCT
VCSYMKSIKDIDPPFATSPSRRAEWREYNNVDPSFLDDLNSRDSGFDSQSGCDPFTHAQG
TVWELVPRDVRKKMFPHQHEGFEFIWKNIAGGIDLDELKNSTSTGGGNGCIISHAPGTGK
TGLTLVFLQAYMKLHPRCRPVIIAPRSMLLTWEEEFKKWGIDIPFYNLNKPELSGKENNG
AVALMDNRKRGRGKVGLIRYVKLYSWKMGTGILGLSYRLFEKLVSGDELSGILLDLPGLF
VFDEGHTPRNDDTCMFKALSRIKTRRRIILSGTPFQNNFQELENTLSLVRQEFGEVLRTV
RKSGHEKSKAKHASLISSIGRCANHRDDEKLKELKEKIAPFVNVHKGTVLQESLPGLRHS
VVILQPDEFQKRLCKAVEGVKSFVELNYCVSLISVHPSLLPQQFFESFDVDSAKLARLKL
DPEAGIKTRFLLILLELSTNEKVLVFSQYIEPLTLIMEQLRHRFNWREGQEVLYMDGKQD
VKKRQSSINVLNDPSSQARIMLASTKACCEGINLVGASRVVLLDVVWNPFVERQAISRAY
RLGQKRVVHVYHLITSETLEWDKLRRQARKVWWSNMVFPSSDGGGNDQTTASEPLEDKIL
EEMAQLYNNPSETLINAIIPQPKETELIETFGEFLNKSS
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcaaccgatagcaaaaagaacccgttctcaaacaaatcgcatgattgaggag
aagtataaaaaacttaaggaaaacaaaggacaagaaaaatatggggctgaatcgtctagt
tctaaggttaatgaatcatccagttctaaggatgatgaatgtgtcaaaggatttgaaatg
gacaatgtgagtgacaaggaggagaaggaggaggggactagatcaaaacaagttgatgat
gattgtggtggttttttgtcagaatcagaaagtgacaatgatggaagtgatcctttaagg
ccaattatagtggattgttgtcctgaagaagatttggatttagatgctgagaatagtagt
ttggggtcaaagacaactgatgagtatgtaattaatgatgattacgtggatgatgatggt
gatgatgacggtgagaaggaggaggaggaggagagggaaactgatgatgaaagtttactg
gaagcacgtacgaaaaataaggggaaattaaaaaagtcaaccaagggaaagcacaaccgt
gagctgaaacatgatcatgttgaaagaattattttgaaatccattttgaatacggaagaa
actccctcagaagattatccatcttccagcagagaggttttaagagatgagatgagtcaa
tcattcaatgatgatgaggagtcaactccatcagagaaatcagagtgtgatgatggcttg
ggttatctctgggctgagatggactttgctcgcaaagtcagcgagctgcattccactaac
tcttccatcctggctgaaaatgaagctgcttcatctaatgaggttgaaactgcgaaaact
cgttgtcaacgaggggatcatgatctcatccttaatgaggaatacggtctttattgcaca
gtctgctcttatatgaagtcaattaaagatattgatccaccttttgctacatctcctagt
agaagagcagaatggagggagtacaacaatgtggatccttcatttcttgacgaccttaac
agccgtgactctggttttgactcccagtcaggctgtgatccctttactcatgcccaaggc
acagtttgggagcttgttcctagagatgttaggaaaaaaatgtttccacatcagcatgaa
ggttttgaatttatctggaagaatattgctggaggaatagaccttgatgagctgaaaaac
tcaactagtactggtggtggaaatggatgtatcatatcgcatgctccggggactgggaaa
accggtctgacccttgtatttctgcaagcatatatgaaattgcatccaagatgcaggcct
gtcatcattgctccccgcagcatgctgcttacttgggaagaagagtttaaaaagtgggga
attgacattcccttttacaacttgaacaagccagagttgtctggaaaagaaaacaatggt
gctgtggctttaatggacaacaggaaacgtggacgagggaaagtgggccttatacggtat
gtgaagctctattcgtggaaaatggggacagggattttgggacttagttacaggttattt
gaaaagcttgttagtggtgatgaattaagtggaatccttcttgaccttcctggtcttttt
gtctttgatgaaggacacactcctcgaaatgatgacacttgcatgtttaaggctctgagc
cgcattaaaacaagacggcgtatcatcctctcagggactcccttccagaataattttcag
gagctggaaaatactttaagtttggtgcggcaagagtttggagaggtgctacgtactgtt
agaaagagtgggcacgagaaaagtaaagcaaaacatgcctctctgatcagttccattggt
agatgtgccaaccacagagatgatgagaaactgaaagagctcaaagagaagattgcccca
tttgtgaatgtacataaaggtacagtgttacaagaaagtcttcctggactgaggcactct
gtggttattttacagccagacgagtttcagaagaggctctgtaaggctgttgaaggagta
aagagctttgttgaattgaattattgtgtctctttaatctctgtgcatccttctctctta
cctcagcaattctttgagagttttgatgttgacagtgccaaattagcaaggcttaaattg
gatccagaggctggaattaagacaaggtttcttttgatcctccttgagcttagtactaat
gaaaaagttttagttttcagtcaatacatagagcctttaaccctgataatggagcagctg
agacatagattcaactggagagaagggcaggaggtattatatatggatggcaaacaagac
gtgaaaaagcggcagtcatccattaatgttctcaatgatccatccagtcaagcaaggata
atgcttgcctcgacaaaggcttgttgtgagggaataaatcttgtaggggcttctagagta
gtgctgcttgatgttgtatggaacccatttgtggagagacaagctataagccgagcgtat
aggcttggtcagaaaagagttgtgcatgtttaccatctgattacatctgagacattggaa
tgggataaattacgtcgacaggctaggaaagtctggtggtctaatatggtgttcccttct
tcggatggaggtggtaatgatcagacaactgcatctgaaccattggaggataaaatttta
gaggagatggctcaactttacaacaatccatctgaaacattgattaatgctataatccct
cagcccaaagaaactgagttgattgagacttttggcgagtttctgaataagagctcttga
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