Citrus x clementina (clementine): CICLE_v10023801mg
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Entry
CICLE_v10023801mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10023801mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CICLE_v10023801mg
Factors involved in mRNA localization
Other mRNA localization factors
CICLE_v10023801mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
18049653
NCBI-ProteinID:
XP_006443294
UniProt:
V4VTN6
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MAAVPVEEAIAALSTFSLEDEQPEVQGPSVLVSTERGATASPIEYSDVNAYRLSLSEDTK
ALNQLNTLIQEGKEMASVLYTYRSCVKALPQLPNSMKHSQADLYLETYQVLDLEMSRLRE
IQRWQASAASKLAADMQRFSRPERRINGPTITHLWSMLKLLDVLVQLDHLKNAKASIPND
FSWYKRTFTQVSVQWQDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLI
VFAVESLELDFALLFPERHILLRVLPVLVVLATSSEKDSESLYKRVKINRLINIFKSDPV
IPAFPDLHLSPAAILKELSMYFQKFSAQTRLLTLPAPHELPPREAQEYPLHHFCYLLRHY
LIANHIGGIRAEHDDFTIRFASAMNQLLLLKSTDNADIEWCKEVKGNMYDMVIEGFQLLS
KWTARIWEQCAWKFSRPYKDAVPSETNEASASYSDYEKVVRYNYSAEERKALVELVSYIK
NIGSMMLRSDTLVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSAD
WMANNSRPEAEQQSMHHVGEESRGNIFYPRAVAPTAAQVHCLQFLIYEVVSGGNLRKPGG
LFATVSTLTDLGFLWFREFYLESSRVIQFPIECSLPWMLVDHVLESQNAGLLESVMMPFD
IYNDSAQQALVVLKQRFLYDEIEAEVDHCFDIFVSRLCETIFTYYKSWAASELLDPSFLF
SSDNGEKYSVQPMRLSALFKMTRVKLLGRSINLRSLIAERMNKVFRENLEFLFDRFESQD
LCAIVELEKLLDILKHTHELLSKDLSIDSFRLILNEMQENISLVSFSSRLASQIWSEMQS
DFLPNFILCNTTQRFIRSSKVPLASVQKPSVPYAKPSFYCGTQDLNSAHQSFARLHSGFF
GIPHMFSIVRLLGSRSLPWLIRALLDHISNKITTLEPLIMGLQETLPKSIGLLHFDSGVT
GCMRLVKEQLNWGTKSELKAEVLHGIKEIGSVLYWMGLLDIVLREVDTTHFMQTAPWLGF
LPGADGQISYHQDGGDSPVVNLFKSATAAIVSNPGCPNPTSFHTMSKQAEAADLLYKANM
NTGSVLEYALAFTSAALDKYCSKWSATPKTGFIDITTSKDFYRIYSGLQIGYLEESSQTP
SNNHKVLGDSVAWGGCTIIYLLGQQLHFELFDFSYQVLNVAEVEAISVPQSQKHPHFGQG
WEALIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENTVSAFETLPQ
RGV
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagttcctgttgaagaagcgattgcggctctgtccacattctcattagaggat
gagcaaccggaggtgcaaggaccatcggttttggtctcaacggaaagaggagcaaccgct
agtccaattgagtatagtgatgttaacgcataccgcctctcactctcagaagatacaaag
gctctcaatcagttgaacacccttatccaagaagggaaagagatggcttcagtgctttat
acataccgtagttgtgtgaaagctctgcctcagcttcctaactctatgaagcacagtcaa
gctgacttgtatttagaaacttatcaagttctggacttggaaatgagtcgcttacgtgaa
attcaacgatggcaagcatcagctgcttctaaactagcagctgatatgcagcgtttttct
aggccggaacggcgtattaatggtcccacaataacccatctttggtccatgctaaagtta
cttgatgtgcttgtgcaacttgatcaccttaaaaatgctaaagcgagcattcctaatgat
ttttcttggtataagaggacattcactcaagttagtgtccagtggcaagacacagattca
atgagagaggagttagatgatttacagattttcttaagcacaaggtgggctatcttactg
aacttgcatgttgagatgttcagagtgaacaatgttgaagacatccttcaagttctcata
gtctttgctgtggagtcattggagctggattttgcacttctatttccagagaggcacatt
cttcttcgtgtcttgcctgtacttgttgtcttagcaacatcatcagaaaaagatagtgag
tctctgtataagagggtgaaaatcaacagactgatcaatatatttaagagtgatccagtc
attcccgctttcccagatcttcatctttcaccagctgcaatattgaaagaattatcaatg
tacttccaaaaattctctgcacaaactcgtcttctcactcttccagcacctcatgagctc
ccaccccgtgaggcacaagaatatccgctacatcatttttgttatctattaagacattac
ctgattgctaatcacattggaggaatccgtgctgagcatgatgattttacaatccgcttt
gcctcagccatgaatcagctattgctgttgaaatcaacagataatgcagatattgagtgg
tgcaaagaagttaaaggaaacatgtatgacatggttattgaaggattccagctcttaagt
aaatggactgcacgcatttgggaacaatgcgcatggaaattttctcgcccatacaaggat
gcagttccttcagaaacgaacgaagcgtcagcatcatattctgactatgaaaaggtggta
cgatataattatagtgctgaagaaaggaaagcactagttgagcttgttagctacataaag
aacattggatcaatgatgttgcggtctgacacattagtagctgatgctttatgggaaaca
atacatgcagaagtccaagattttgtccaaaacacattggccactatgttacggactacc
ttccgaaagaagaaagatctttcaaggattctttcagatatgaggaccctttcagcagat
tggatggcaaacaatagcaggcctgaagcagagcaacaatctatgcaccatgttggtgaa
gaaagcagaggaaatatcttttatccaagggcagttgcacccacagctgcacaggtccat
tgcttgcagttcctcatttatgaggtggtatctggtggtaatctaaggaagcctggggga
ctcttcgcgactgtttctactttgacggatcttggtttcttatggtttagagaattttat
ctggagtcttctcgtgtaattcagtttccaattgaatgctctcttccctggatgctggtg
gatcatgtgcttgagtcccagaatgcaggtcttctagaaagtgttatgatgccatttgac
atctataatgattcggcgcagcaggcattggttgtattgaaacagcgtttcctctatgat
gaaatagaggctgaggtggaccattgttttgacatatttgtttcaagattgtgtgagact
attttcacatattacaaaagctgggcggcaagtgagctgcttgatccatcattccttttt
tcctcggacaatggagaaaaatattcagtccagcctatgagattatctgcactttttaag
atgactagagtgaagttacttgggaggagcattaatttaagaagtttaattgctgaacgg
atgaataaagtatttagagagaaccttgagtttctattcgatcgatttgagtctcaggat
ctatgtgccatagtggaattagaaaagctgctggatattttaaagcatacccatgaattg
ctttccaaggatctttcaatagattcattcaggctcatcttgaatgaaatgcaagaaaac
atatccctggtgtcattttctagtcgacttgcttctcagatttggtcagagatgcaaagc
gatttcttgccgaattttatcctttgtaatactactcagcgtttcatccgatcatcaaaa
gttcctcttgcttctgttcaaaagccttctgttccctatgccaagcctagtttctactgc
ggtactcaagatttgaactctgcacatcaaagctttgcacgtttgcatagtggattcttt
ggaataccccacatgttttctattgttcggcttcttggatccagatcattgccttggctt
atccgagcactactagatcatatatcaaataagataacaacactggaaccgttgattatg
gggttgcaagaaaccttgccaaagtctattggtctactgcattttgatagtggtgtaaca
ggttgtatgaggcttgttaaagaacaacttaattggggaacaaagtctgagctcaaagca
gaggtgcttcatgggattaaggagattggaagtgtgttatattggatggggcttcttgat
attgtgttgagagaagtagataccacacatttcatgcaaacggccccttggttaggcttt
ctccctggtgcagacgggcaaatatcctatcaccaagatggtggagacagccctgttgtc
aaccttttcaaatcggctaccgctgcaattgtgtcgaaccccgggtgcccaaatccaaca
tctttccacaccatgtcaaagcaggcagaagctgcagatcttttgtacaaggccaacatg
aatactggaagcgtgctggaatatgcccttgcatttacgagtgctgcattggataaatac
tgtagtaaatggagtgccactcccaagacagggttcattgacatcacaacttcaaaggat
ttctatcgcatatattctggtcttcaaattggatatctagaggagtcttctcaaactccg
tctaacaatcacaaagtgcttggtgattcagtggcatggggtggttgtaccataatatac
ttgcttgggcaacaactacattttgagctttttgatttttcgtatcaagttctcaatgtt
gctgaagtggaagctatatcagtcccacagtcacaaaagcatccccattttggccaggga
tgggaagccctaatagaagcaatgaagaaagcaaggagactgaacaaccatgtattctcc
atgctgaaagcacgttgtcccctcgaagacaagacagcttgtgctataaagcaaagtggt
gctcccctgcatcggattaagtttgagaatactgtctcggcatttgaaactctgccacag
agaggtgtctga
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