Citrus x clementina (clementine): CICLE_v10023918mg
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Entry
CICLE_v10023918mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K09273
upstream-binding transcription factor
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cic03000
]
CICLE_v10023918mg
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10023918mg
Transcription factors [BR:
cic03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
CICLE_v10023918mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
CICLE_v10023918mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
Motif
Other DBs
NCBI-GeneID:
18049858
NCBI-ProteinID:
XP_006439386
UniProt:
V4TRX8
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MASSDVASMAVEPSKKPRSRRALKPKNSLANEAVVMAQTPSQSPIPNPPDAGLSKENHES
LSQPKKAAAKGKAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKE
EELELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKKGCAERKRPSPPY
ILWCKDQWNEVKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKE
RRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFS
SERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEDEGALSLKKEEEELMKLQKQEA
LQLLKKKEKTDNIIKQKNKEKRQKKKQQEIDPNRPKKPASSFLLFSKEARKILLEERPGT
NNSTINALISVKWKELGEEEKQDWNAKAAEAMEAYKKALEEYNKSVAS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggctagttctgatgttgcttcaatggccgtggaaccttcaaagaaaccaagaagtaga
agagctttgaaaccaaagaattccttggcaaatgaagctgttgtcatggcacaaaccccc
tctcaatctccaatcccaaatccaccagatgcaggcctttctaaagagaaccacgagagt
ctctctcagcccaagaaggcagcagcgaagggaaaagcaaagcaggcaacgaaaaagcaa
gatacatcttttgacaaagacttgcaagaaatgcaagaaatgcttgagaagatgaagtta
gagaaggagaagactgaggagttgttgaaggagaaagatgagatgttgaagatgaaggag
gaagaactagaattgcaaggaaaagagcaggagaagcttcatatggagctgaagaagtta
cagaaaatgaaggagtttaagcccaacatgactctcccaattgttcaatgtttgaaagac
aaagaacaggacagaaagaagaagggatgtgctgagaggaaaaggccatctccaccttac
attctatggtgcaaagatcaatggaatgaggtcaagaaagagaacccagaagcagaattc
aaagagatcacaaacattctgggtgccaagtggaagaatgttagtgcagaagagaagaag
ccttatgaggagaagtatcaggctgagaaggaagcctatttgcaggtaatggccaaggag
aggcgtgaaagtgaagcaatgaaactcttagaggaggagcataaacaaaagacagctatg
gagttgcttgaacaatatctccagttcaaacaggaagctgataaagagaacaagaagccc
aagaaagagaaggatccattgaagccaaagcatcctgtgactgcatatttcctgttctca
agcgagagaagggcagctttactagcggacaacaagaatgtcttggaggtcgcaaagatc
actggtgaagaatggaaaaacatgacagaagaacagaaaagaccttacgaggaggatgaa
ggagctcttagtctaaagaaagaagaggaggaactgatgaaacttcaaaaacaggaagca
ttacaacttctcaagaagaaagagaagactgataacataatcaagcagaaaaacaaagag
aagcgccagaaaaagaaacaacaggagattgatccgaacaggcctaagaagcctgcatct
tcattcctgctgttcagcaaagaagcaaggaaaatcttgttggaggagcggccagggacc
aacaactctaccatcaatgcactgatttcagtgaaatggaaggaacttggagaagaagag
aagcaagattggaatgcaaaggcagctgaagcaatggaggcatacaagaaggcactggaa
gagtacaacaaatccgttgccagctga
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