Citrus x clementina (clementine): CICLE_v10024065mg
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Entry
CICLE_v10024065mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K06636
structural maintenance of chromosome 1
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10024065mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
CICLE_v10024065mg
Meiosis-specific proteins
Cohesin complex and associated proteins
CICLE_v10024065mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Fib_alpha
ABC_tran
DUF1664
Laminin_II
SbcC_Walker_B
NPV_P10
Motif
Other DBs
NCBI-GeneID:
18046613
NCBI-ProteinID:
XP_006443835
UniProt:
V4TZ79
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MPSLLSPGKIHRLELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTG
QLRGGQLKDLIYAYDDKEKEQKGRRAFVRLVYQLGNESELQFTRTITSSGGSEYRIDGRV
VNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEVL
EDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEHFLWQLFNI
EKDITKASKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKKIAERNNRL
DKSQPELLKLNEEMSRINSKIKSSKKELERKREERRKHANDIKELQKGIQDLTGKLEELN
EKSRDGAGRLPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLDREQHADLEVLKNLEANLQ
QLSNREHELDAQEDQMRKRQKNILDASGGHKDELTKLKKELRSMQDKHRDSRQKYENLKS
KIGEIENQLRELKADRHENERDAKLSQAVETLKRLFQGVHGRMTDLCRPTQKKYNLAVTV
AMGKFMDAVVVEDENTGKECIKYLKEKRLPPMTFIPLQSVRVKPIIEKLRTLGGTAKLVF
DAVLFAVGNTLVCDGLDEAKVLSWSGERFRVVTVDGILLTKAGTMTGGTTGGMEARSKQW
DDKKIEGLKRKKEQYESELEELGSIREMQLRESETSGKISGLEKKIQYAEIEKRSIEDKL
ANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDINKLERRINEITDRLYRDFSESVGVA
NIREYEENQLKAAQNVAEERLNLSNQLAKLKYQLEYEQKRDVESRIKKLESSLSTLENDL
KQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDECEKEIQEWEKQASAATTSLSKLN
RQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPMETDSSSPGPVFDFSQLNRSYLQ
ERRPSEREKLEVEFKQKMDALISEIEKTAPNLKALDQYEALLEKERTVTEEFEAARKEEK
QAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLH
GIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAK
VAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFYDKAEALVGVYRDSDRSCSRTLTF
DLTKYRES
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccctactctcgccgggcaaaatccaccggttagaactcgagaacttcaagtcc
tacaagggcctccagataatcgggcctttctcggacttcacggccataattggaccgaac
ggggcgggcaaatcgaacctaatggacgccataagtttcgttcttggggtccgtacgggc
cagctccgtgggggccagctgaaggatctgatttacgcctacgacgataaagaaaaggag
cagaagggaaggcgagctttcgtgaggctggtgtatcagttgggtaacgagtccgaactc
cagtttactagaaccattaccagttccggcggaagcgagtaccgaattgacggaagggtt
gtcaattgggacgagtacaatgccaaattgaggtctcttgggattcttgtgaaggccaga
aattttctcgtctttcagggagatgtggagtccatcgcatctaaaaatcccaaggagctt
actgcacttcttgagcagatttctggttctgatgaactcaagagagaatacgaggtgctg
gaagatgaaaaagggaaagcagaagagaagtcagcacttgtttatcagaaaaagagaaca
gtagtcttggagaggaagcagaagaaagaacaaaaggaagaagcagagaggcatcttcgc
ttgcaagatcaactgaaatctttgaagaaagaacactttctatggcagttgtttaacata
gaaaaggatattaccaaggcaagtaaggatcttgaagctgagaagagatcccgtgaagaa
gtcatgcgagaattagagcattttgaagatcaaaagagaggaaagaggaaggaattagca
aagtacttgaaagagatagcgcaatgtgaaaagaaaattgctgagagaaacaatagactt
gacaaaagtcaacctgagcttctgaaattaaatgaagaaatgtctcgcattaattcaaaa
atcaagagcagcaaaaaggagcttgagagaaagagagaagaaaggaggaaacacgctaat
gatatcaaagagctacagaaaggcatacaagatctgacaggaaagctggaagagttgaat
gaaaaaagtcgagatggtgctgggagacttcccttgcttgacactcaactaacagaatat
tttcaaattaaagaagaggctggaatgaaaaccgcaaagctaagagatgagaaagaggtt
ctggatagggaacaacatgctgatcttgaagtgttaaagaatctggaagcaaatcttcaa
cagcttagtaatagggagcatgaactggatgcacaggaggatcaaatgcgaaagagacaa
aaaaatattttagatgcttctggcggacataaggatgagctcacaaagttgaaaaaggaa
cttcgttcaatgcaagataaacaccgagattccaggcaaaaatatgaaaacctgaagtct
aaaattggtgaaatagaaaatcaattacgtgaattgaaggctgatagacatgaaaatgag
agggatgctaaactgtctcaagctgtggagactctgaaacgcctatttcaaggtgttcat
ggtcgcatgacagatctttgtaggccaacccagaagaaatacaaccttgctgttaccgtt
gccatgggaaaatttatggatgcagtggtggttgaggacgagaatactggaaaggaatgc
atcaagtatttgaaagagaagaggcttcctccgatgacttttatacctctccaatcagtt
cgagttaagcctatcattgagaagttacgtactttaggtggtacagcaaagctggtcttt
gatgcagttctctttgctgttggaaatactctagtctgtgatgggctggatgaagccaag
gttcttagctggagtggggagagatttagagttgttactgttgatggaattctactcaca
aaagctggcacaatgactggtggtaccactggtggaatggaagcaaggtcaaaacaatgg
gatgataagaagattgaaggacttaaaagaaagaaagaacagtatgaatcagagttagaa
gagcttggttctattagggagatgcagctaagagagtctgaaacatctgggaaaatcagt
ggacttgagaagaagattcaatatgctgagatcgagaagcggagcattgaggacaagctt
gcaaacctgaggcaggaaaagcgtactatcaaggaagaaattggtcgtataaaacctgac
cttcaaaagttaaaggataaaattgataggaggaccacagatatcaacaagctggaaagg
aggatcaacgagattactgatcggctctacagagatttcagtgagtctgttggggtggca
aacatccgcgagtatgaagaaaaccagctcaaggctgcccaaaatgttgctgaagaaagg
cttaatttgagtaatcagctggcgaagttgaagtatcaattggagtatgagcaaaagcga
gatgtggaatcacgaattaaaaagctggaatcttccctcagtaccttagaaaatgatttg
aaacaggttaagaagaaagaaggtgacgtcaagtcagcaacagaaacagccacgggggat
atcactcgttggaaggaagaaatgcgaggatggaaatccaattcagatgagtgtgagaag
gagatccaggaatgggaaaagcaagcttctgctgctactacaagcctatcgaaattgaat
cgtcagattaattctaaggaggcacagattgaacagctgatttcacggaagcaggaaatt
atggagaagtgtgaactagaatgcatagtccttcccactgtcgaagacccaatggaaact
gattcttcatctccaggccctgttttcgattttagtcagttaaataggtcttatttgcag
gagaggagaccatctgagcgcgagaagcttgaggttgaattcaagcagaaaatggatgcc
cttatttcagaaatagaaaaaacagctccgaatttgaaggcgttggaccaatatgaagct
ctgttagagaaagaaaggacggtaacagaagagtttgaagctgccaggaaagaggagaag
caggcagctgatgcttacaattcagttaagcagaagagatatggtttgtttatggaagct
ttcaatcatatttcaagtagcattgatagaatatacaaacaactaacaaggagtaatacg
cacccactgggtggaacagcatatttgaacttagaaaatgaagatgacccgttcttgcat
gggatcaaatacactgctatgccaccaacaaagcgcttccgtgatatggagcaactctct
ggtggggagaagacagttgcggccctcgcattactcttctctattcacagctacaagcct
tcgccttttttcatactggatgaagttgatgcggctttggataatttaaatgttgccaag
gtagctggattcatccgctcaaaatcatgtgagggaaccaggggaaatcaggatgcggat
gaaggcaatggttttcagagtattgtgatatctctgaaggatagcttttatgacaaggct
gaagctttggttggggtttacagggactcagatagaagctgttcaagaaccctgacattt
gacctgacaaagtaccgagaatcttga
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