Citrus x clementina (clementine): CICLE_v100245901m
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Entry
CICLE_v100245901m CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CICLE_v100245901m
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cic03032
]
CICLE_v100245901m
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v100245901m
DNA replication proteins [BR:
cic03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
CICLE_v100245901m
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
CICLE_v100245901m
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTT107_BRCT_5
BRCT
BRCT_2
PHD
Motif
Other DBs
NCBI-GeneID:
18050076
NCBI-ProteinID:
XP_006444468
UniProt:
V4TBN4
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
GYELETMEAEAKDSEEEIEVASLKQFGGRDVNKSPHNLNVGIINAHESPKSTLEGQGLLV
GSTIPEASSGIDNATDMLSTPSRVSRSHQISGFDNVNITEVNGCHYTGASRDNSHEKTPN
SAKVKSDLVPTSKNAEISYHSGSKFCSLNYSRKTPRKSILTMSSGKVDNDVLNIISSKVE
NAETRTVTACGEIPKRGGELCHEEESIVLPQKRMSNSTGAGSKSQKMSHNAAECNPRSPI
NYKTPVSETKSSACHSFETGNHLSPGSNGHYTIETATPSTAPNKKPLTPDLPSLKTVTSE
ALHSEGADRNALETCRGSKESTVASKTDNEDFGMGSVHLDGEAEDAQNLHQDLEGSSAKN
RFLAMDKSPRPVNIVSPQVGKDKLIAKPIRKKMVAKKAFGSGHTTNRKGSIYSNKISSLS
SPAVCLSREVERANQKKFSSTSELETDPPNLSDEATKEMETTLVAKCGDNSGDGIKTMDD
ETEAPDEKYEIEFEKMLNNEKSEGVQSIHKEDTMMKRVPGVGHEAHDSMVYGRDGITGKE
VMNAEVGMTVSGKRFDLDESTSKMDGMKSKRKIRPSDKANGNVSADKETVESWDDEAEAA
DEKVGNVFEEALNDEKPEGVELIHKEDAELKRIPGAGHEAHDSVVCRHDEITGKEGINAQ
VRTTLSGEMFDLDESNSKRDGTKCKINRAKKRPSGKASLKTLSADKGTVESKKDVVGEEN
LNGEKNEECREKEKNVLLPRSKTRVITASASKVGSSDEVEKENRPVADEGQTSSPGVGKS
ILKSMKVSMKNKIGGNVNSNSIPLDKSLNKLDKSLNKLKDEPIWFILSGHRLQRKEFQVV
IRRLKGRLCRDSHQWSYQATHFIAPEIRRTEKFFAAAASGRWILKTDYLSACSQAGKFLP
EEPYEWHKNGLSEDGAINLEAPRKWRLLRERTGHGAFHGMRIIVYGDCIAPPLDTLKRVV
KAGDGNILATSPPYTRFLNSGVDFAVVSPGMPRVDLWVQEFLKHEIPCVVADYLVEFVCK
PGYSLERHVQYNTHAWAEKSLSNLLSKAEEIVMDLTPPNDYDTDKITCQACGCSDRGEVM
LICGDEGGSVGCGVGMHIDCCDPPLESVPEEDWFCP
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
ggttatgagttggagacaatggaagctgaagctaaggattctgaagaggagattgaagtt
gctagtctgaagcaatttgggggcagagatgtgaataagagtcctcataatttaaatgtt
ggcattattaatgcccatgaatcacccaagtcgacattggaagggcagggactactggta
ggttcaaccattcctgaagcttcttcaggcattgacaatgctacggacatgttatcaact
ccaagcagagtgagtagatctcatcaaatctcaggctttgataatgttaatattactgag
gtgaatggttgtcattacactggtgcttctagggacaatagtcatgagaaaactccaaat
tctgctaaagtgaaaagtgacttagtacctacttcaaaaaatgctgaaatttcctatcat
tctggatcaaaattttgttctctgaattactctaggaaaacccctaggaagtcaatactc
acaatgtcctcagggaaggtagacaatgatgttctcaacattatttcctccaaagtggaa
aatgcagagaccagaactgttacagcttgtggtgaaattcctaagagaggaggagaactg
tgtcatgaagaagagtcaattgtgttacctcaaaagagaatgagtaatagtactggtgcc
ggttctaaatcacaaaagatgagtcataatgcagcagaatgcaacccaaggagtccgatt
aattataaaactccggtatcagagacaaaatcatcagcttgccattcatttgagacaggt
aaccatttatcccctggcagtaacggccattatactattgaaactgctactcctagtact
gcacccaacaagaaaccactgacacctgatctgccttcattaaaaactgtgacctcagaa
gccttgcacagtgagggcgctgatagaaatgcccttgaaacatgcaggggatcaaaagag
tccactgttgcaagcaagactgataatgaagattttggtatgggatctgtacatttggat
ggtgaagcagaggatgcacagaatctgcatcaggaccttgaggggtcatctgccaaaaac
agatttttggctatggacaaatcacctagacctgtaaatatagtctctcctcaagtggga
aaggacaaattgattgcaaagcctattaggaagaagatggttgccaaaaaggctttcggt
tctggacacacaaccaatcgaaagggttctatttactctaacaaaatttcctccctaagc
agtcctgctgtttgcttgagtagggaggtagagagagccaaccagaagaaattctctagt
acgagtgagcttgagacagaccctccaaatttaagtgatgaagcgacaaaagagatggag
acaacactcgttgcaaaatgtggagataattctggtgatgggatcaagaccatggatgat
gaaactgaagctcctgatgaaaagtatgaaattgagtttgagaagatgctaaacaatgag
aagtccgaaggggttcaatccatacataaagaagatacaatgatgaaaagagtacctgga
gttggccatgaagcacatgattctatggtttatggacgtgatggaataactggcaaggaa
gtaatgaatgctgaagttggaatgactgtttcaggcaagagatttgacttggatgaatca
acctccaaaatggatggtatgaaaagtaaaagaaagataaggccttcagataaggccaat
ggaaatgtttctgctgacaaggagacagtagaatcctgggatgatgaagctgaagctgct
gatgagaaagttggaaatgtgtttgaggaggcactgaatgatgagaagcctgagggggtt
gaactcatacataaagaagatgcagagttgaaaaggatacctggagccggtcatgaagcg
catgattccgtagtttgcagacatgatgaaattactggaaaggaagggataaatgctcag
gtaaggacgactctttctggtgagatgtttgacttggatgaatcaaattccaagagggat
ggtacgaaatgcaaaataaatagagcaaagaaaaggccttcgggtaaggccagtttaaag
accctttctgctgacaaagggacagtagaatccaagaaagatgtagttggggaagaaaat
ttaaatggagagaaaaatgaggaatgcagagaaaaagagaaaaatgtgctgcttccaaga
agcaaaacccgggtcatcactgcatctgcaagtaaggtggggagctctgatgaagtggag
aaggaaaacaggccggttgctgatgaaggccaaacttcaagtccaggtgttggaaaatca
attcttaaatctatgaaagtatcaatgaagaataaaattggtggaaatgttaattccaat
tcaataccattggacaagtctctgaacaaattggacaagtctctgaacaaactgaaagat
gaacctatatggtttatattaagtggacatagactacagagaaaggaatttcaggtggtt
ataaggcgtttgaaaggaagactatgtagagattctcatcagtggtcataccaggcaaca
cactttattgccccagaaattcgcagaacagagaagttctttgctgctgcggcatctgga
aggtggattctcaagactgattatttaagtgcttgtagccaggcaggaaaattcttgccg
gaggaaccttacgaatggcacaaaaatggcctcagtgaagatggtgcaattaatttagag
gctccaaggaaatggcggctcttaagggagagaacaggtcatggtgcctttcatggaatg
cgcattattgtttatggagattgcattgcgccacctctggatacactgaagcgcgtggtg
aaggctggagatgggaacatattagctacttccccaccttacactcgctttctaaattct
ggagttgactttgctgttgttagtcctggtatgcctcgtgttgatttgtgggtccaagag
ttcttaaaacatgagataccttgtgttgtagctgattacttggtggagtttgtttgcaaa
cctggttattcccttgagagacatgtgcaatataacactcatgcttgggcagagaagtca
ttatccaatctgcttagcaaggcagaagaaatagttatggacttgactcctcccaatgat
tatgatactgataagataacttgccaagcgtgtgggtgcagtgacaggggtgaagttatg
ctgatctgtggagacgaaggtggttctgttggttgtggggttggaatgcatattgattgt
tgtgatcctcctcttgaaagtgttccggaggaagactggttctgtcca
DBGET
integrated database retrieval system
