Citrus x clementina (clementine): CICLE_v10024698mg
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Entry
CICLE_v10024698mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03255
protein TIF31
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cic03012
]
CICLE_v10024698mg
Translation factors [BR:
cic03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
CICLE_v10024698mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
eIF3_p135
TPR_10
TPR_NPHP3
TPR_2
CLU
TPR_8
DUF5969
TPR_9
TPR_MalT
PAM2
TPR_1
Motif
Other DBs
NCBI-GeneID:
18036193
NCBI-ProteinID:
XP_006427424
UniProt:
V4UMN8
LinkDB
All DBs
Position
Unknown
AA seq
1519 aa
AA seq
DB search
MAAIHPTPKLSEFYDFFSFSHLTPPVLNLRKCERKEGDKRDSDYFEIQIKICNGKLIQVV
ASVKGFYTLGKQFFQSNSLVDLLQNLSRAFANAYESLMKAFVEHNKFGNLPYGFRANTWL
VPPSVAESPSNFPCLPAEDENWGGNGGGQGRDGEHDLRPWATEFAILARLPCKTEEERVV
RDRKAFLLHNQFVDVSIFKAVGAIRRLIDSNLHTQDTIKGAILHEDRVGDLSITVKRDTV
DANLKSEVTIKGNQLSGMSTAEVAQRNLLKGVTADESVVVHDTSSLGTVIVRHCGYTAVV
KVVGDVTEKFGTQDIEIEDQPDGGANSLNINSLRLVLQKSFSAESARGDQSPLCNLDNSE
ALRSLVRRVIKQSLAKLELEPTASERSIRWELGSCWVQHLQKQETPTDIKSTTSGDDIET
EHAVKGLGKQFKFLKKRENRPNLVGSNYEANEDDNGPCSMNVGTNGRQQSNGELNCEMEL
KKLISEESFLRLKETGTGLHSKAVDELMKMTYKYYDDIALPKLVTDFGSLELSPVDGRTL
TDFMHLRGLQMRSLGRVVELAEKLPHIQSLCIHEMVTRAFKHVLKGVIASVDYLSDLSAA
IASSLNFLFGCCEMEDDQSLNEDHILRLQWLRTFLGRRFGWSLKDEFQHLRKISILRGLC
HKVGLELVPRDYDMECPNPFTRDDIVSMVPVCKHVGCTSADGRTLLESSKIALDKGKLED
AVNYGTKALARMIAVCGPYHRTTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGL
DHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEG
MGNVHLSLRYLHEALKCNQRLLGGDHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLKIL
QAKLGLEDLRTQDAAAWLEYFESKALEQQEAARNGTPKPDASIASKGHLSVSDLLDYISP
GQDSKRSEAHRKQRRAKVMQIREKIHGAHHDMMVEDALPHDGLKKRMTIVESKTEEVIED
SVQPEEPEENDDITRYGPAISGEFVEETNSDEGWQEANPKGRSGNAAVRKLSRRRPVLTK
LNVNGCEHSNLREKGNRREIVSPAREKASRTTTTELTGTKDSIKLQGKASVSKVYASPPN
LTAMASKSLSYKEVAVAPPGTVLKPLPEKPDEEIEEKTETQMCSNAPETSKAELNNHFSP
VEDAPVDGQSQETHGSVTQSETTAADTEEVPTSSNEEKPMETNGSKLSATAEPFNPGAVS
MTHLLNSVAATSIYDARTSQGMLAEPAVPSAAARVPCGPRSPLYYRNNYSYMMKHGFPKY
HSSIMERNLLGPSRIMNPHAPEFVPMRGWQINPGYADSNVSNESNSSNDTSEADDEKLDK
MSSIQGEDNTSRKSSTEAENSELARQILLSFIVKSVQHNMDAPSHSSGYEKKIGYSENSS
DAIANDSAIIKILYGNEKGKTNLASQSNDQEQQKPKDENQKSGDGEGFIVVRKRRRNRQQ
ITNGVTEMYNHQSICASVR
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atggcagccattcacccgacgccgaaactctccgagttttacgacttcttctctttctct
cacctcactccccccgtcttaaatttgagaaaatgtgaacgcaaagaaggagacaagcgc
gacagtgattattttgaaattcagataaaaatctgcaatggaaagcttatacaagtagtt
gcatcagtaaaagggttctatactttgggaaagcagtttttccaaagcaactccctggtg
gatcttctgcaaaatctcagtcgagcttttgccaatgcatatgaatccttaatgaaagct
tttgttgaacataataagtttggtaatcttccctatggatttcgagctaatacatggctt
gtacctccatctgttgctgagtctccatcaaatttcccttgcctaccggcagaagatgag
aattggggtggcaatggcggaggccagggaagagatggagaacatgatttacgaccatgg
gcgacggaatttgctatactggctaggcttccttgcaaaactgaagaggagagggtggtt
agagatcggaaggcctttttgcttcataaccaatttgttgatgtctcaatttttaaagct
gttggagcaatacgccgtctcattgattcaaatttacacactcaagatacaataaagggg
gcaatcttgcatgaagatcgtgtgggagacttgtccattacagtaaaacgtgatacagta
gatgcaaacttgaagtctgaggttactattaaaggaaatcagttatctggtatgtctact
gcagaagttgctcaaaggaatttactaaaaggtgttactgcagatgagagtgtagttgtt
cacgatacctcctcattgggtaccgtcattgtaagacactgtggatacaccgccgtagta
aaggttgttggtgatgtgacggagaagtttggcacacaagatattgaaattgaagatcaa
cctgatggaggagctaattctcttaatattaacagcttaaggcttgtacttcagaagtct
ttcagtgctgaatcagctagaggagaccagtcacctctgtgcaatttggataattcagaa
gctcttagaagtcttgtacgaagagttattaaacagagtttagcaaagctagagctggag
ccaactgcgtcagaaagatctattagatgggaacttggttcttgttgggtgcaacatcta
caaaagcaggaaaccccaacagatatcaagtcaacgacgtctggggatgatattgagact
gaacatgctgtcaaaggtcttgggaagcaatttaaatttttgaagaagagggagaacaga
cctaaccttgttggtagcaattatgaggctaacgaagatgacaatggaccgtgcagcatg
aatgtgggaactaatggcagacagcaaagcaatggcgagctcaattgtgagatggaattg
aaaaaactaatttctgaagaatccttcttgcgattgaaagaaactggcactggccttcat
tcaaaggcagtggatgagcttatgaaaatgacatacaaatattatgatgacattgcttta
ccaaagctggtaacagactttggatcacttgaactttctccggttgatggccgcacactg
acagactttatgcatttaaggggactacaaatgcgctctttaggtcgcgtggttgaactt
gcagagaagcttcctcacatacaatcactttgtattcatgagatggttactcgagcgttc
aagcatgtacttaaaggagtcatcgcatccgttgactatttatcagacctatctgcagct
atagcttcttccctaaatttcttatttggctgttgtgagatggaagatgaccaaagcttg
aatgaagatcatatccttagattgcagtggctacgaacatttcttggcagaagatttggt
tggtccctgaaagacgagtttcagcatttgagaaagatttcaattctacgtgggctttgc
cataaggttgggttggagttggttccaagagattatgatatggaatgtccaaacccattc
acgagagatgatattgtcagcatggttcctgtgtgcaagcatgtaggttgcacttcagct
gatggacggactttattagagtcatccaaaattgcccttgataaaggaaaactagaagat
gctgtaaattatgggacaaaggcactggcaaggatgatagctgtttgtggtccctaccat
cggactactgcaagtgcttacagtcttctagctgtagttctctaccatactggagacttt
aatcaggcaactatatatcagcagaaggcattggatattaatgagagggaacttggtctt
gaccatccagatacaatgaaaagctatggggatctttcagttttctattatcgccttcaa
cacattgaattggctcttaaatatgtaaatcgtgccttattccttttgcattttacttgt
ggactttcacatccaaacacggctgcaacatacataaatgtggctatgatggaagagggc
atgggaaatgttcatctttctcttagatatttgcatgaagcccttaaatgcaaccaaaga
ctattaggaggtgaccatatacagacagctgcaagttatcatgccatagccatagctctt
tctttgatggaggcatattcactaagtgtgcaacatgagcaaactacacttaagattctc
caagcaaagcttggactagaagatctgcgtactcaggatgctgctgcatggctggagtat
tttgaatcaaaagctctagagcagcaagaagcggcacggaatggaactccaaagccagat
gcgtccattgcgagtaaaggtcaccttagtgtatcagatctcctggattacattagtcct
ggtcaagattctaaaagaagcgaagcacataggaaacaacgacgtgcaaaggtaatgcag
attagggaaaagattcatggagcacatcatgatatgatggtggaagatgcactgccccat
gatggattgaaaaagaggatgactatagtggaaagcaagaccgaggaagtaatagaagac
agtgttcaacctgaagagccagaagagaatgatgatattactagatatggaccggcaatt
tcaggtgagtttgtggaagaaacaaattcagatgaggggtggcaagaagccaatccaaaa
ggtaggtcaggaaatgctgctgttcggaagctcagccggaggcgacctgttcttacaaag
ctaaatgtcaatggttgtgaacattcaaatcttagagaaaaaggcaatagacgggaaatt
gtatctccagcacgggaaaaagcttcaaggaccaccaccactgagttaacaggcacgaag
gattcaattaaattgcagggaaaagcttctgtctccaaagtttatgcaagtccaccaaac
cttactgccatggcttccaagtcgctgtcttacaaagaagtagctgtggcaccaccaggt
acggttctaaagccattaccagagaaacctgacgaagaaattgaagaaaaaactgaaaca
cagatgtgcagtaatgctcctgagacatcaaaggcggagttgaataaccatttctctccc
gttgaagatgcgccagttgatggtcagtctcaagaaactcatggaagtgtaactcaatct
gaaactactgctgcagataccgaggaagttcctacttcttctaatgaggaaaagcccatg
gaaacaaatgggagtaagctttctgccacagctgaaccattcaacccaggagctgtctcc
atgactcatctgctaaactctgtagcagccacgagtatttatgatgcgagaactagtcaa
ggtatgcttgcagaacctgctgtaccttcggctgctgctagagttccttgtgggccaagg
tcgcctctctattatagaaataattattcttacatgatgaaacatggatttccaaaatac
cactcttccattatggaaagaaacctgttggggccttcaagaatcatgaacccgcatgca
cccgagtttgtgccaatgagaggttggcaaataaatcctggatatgcagattcaaatgtt
tcaaatgagtcgaactcttcaaacgacacaagtgaggcagacgatgagaaacttgacaaa
atgtccagtattcaaggcgaggataatacctcaagaaagagcagtacagaggcggagaat
tcagagctggcaagacagatactacttagcttcattgtaaagtcagtccagcataatatg
gatgctccaagtcattcttcaggctacgaaaagaagattgggtattcagaaaattcttca
gatgcaattgcaaatgatagtgctatcataaagatcctttatggaaatgaaaagggcaaa
acaaacttggcatctcagtccaatgatcaagaacagcaaaaacccaaagatgaaaaccaa
aaaagtggggatggtgaaggatttatagttgtcagaaaacggagaagaaaccgacagcag
atcacaaatggggtcactgagatgtacaatcatcaatccatctgtgcttctgttcgttaa
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integrated database retrieval system
