Citrus x clementina (clementine): CICLE_v10024702mg
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Entry
CICLE_v10024702mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K08739
DNA mismatch repair protein MLH3
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CICLE_v10024702mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10024702mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
CICLE_v10024702mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
MutL_C
HATPase_c
Motif
Other DBs
NCBI-GeneID:
18037447
NCBI-ProteinID:
XP_006425274
UniProt:
V4UGP9
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MKGISVTLLASRVITRRGLNLCYSTEKPPFFPPQPSSFPKTHKREGKKRSKLYACPRKNT
ETLSLMGTINRLPEAVRNTVRSGTVLSDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVK
VVDDGSGISRDGLVLLGERHATSKLGHLADLDDATGIGTFGFRGEALASISDVSLLEIIT
KAHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS
VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLNEVNAND
GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL
KGKRSKSQACPAYLLNLRCPHSLYDLAFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA
HDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQK
DPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDHRVWTIESSWFQDHQPSRH
LFSPPLENLKKEGDHLFRKECERITFGDAEKDPAELQEENTEMEYVPQPKYSFGLSDGSF
AKCLPIVPWKIDRHAWTIESSRFQYHQSSPHLYSSPLENLSKEGDHLFREECERIIFGEF
EKHTPELEEENSKRELVSQPKYSSKLLDCSFAECLSPVLQKIDLHGWTSGNRFSLKGSYF
LETCFLADGRSSIPVEGDLLNSQQGYEYPQIEPGVSNGASGTASPLDKDEFSNEFEVSKD
IKKPLRQSCFSQGSPPLGGALFSGGEERCESSTGCFKYKRKRKRVCYDKRMDILEADFSN
QSFDSFSRTPLQDEASCSQHLPRLTTAGDITAGFDLMSRASLNLFPSHAEPFTKETNFLS
DSIEPVGNSISDYKALNSVWCSKISDPFPQGASWNDGHFIYNNALEGNSILGEGTSRGQL
ADTEENYKFDYDSKLRRSNQEKCTTARSGLRFEYYDSSSEDFCKYLQEHDPCNKFSPEHS
DVPFDKTDWLCSVSSSIEYDNPETQRYKFRNHNCEPNPIHKELSRRSHSAPPFHRHKRRY
ISLNCCSVEAGKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNTNVKPSSEEEDFRPDFKIE
SSTILDLEETHKAENFKLSLCPHAHLAAQAEGTIISGTKWRNGHPQTTNNNISCDIHNQD
NILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADER
IRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRS
FNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSK
ACRGAIMFGDFLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQLNNSS
ELWHGLHRGEISLKRASRRLLTGGRG
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtatttcagtaactttgctggccagcagagtaattacccgccggggactaaac
ctatgttactccaccgagaaaccgcctttttttcccccccaaccctcttcgttcccgaaa
acccacaaaagagaagggaaaaaaagatcgaagctttatgcgtgcccgcgaaaaaatact
gaaactttatctttaatggggaccatcaaccgattgccagaggcagttcgcaatacggtg
cgttctgggactgtcttgtctgacttaacaagggttgttgaggagctcgtttttaacagt
gttgatgctggggcaacaaaggtatttgtttatgtcggggtttgcaattgttatgtgaaa
gtagtggatgatggatctggcatttctagagatgggttggtgttgttgggagaaagacat
gcaacgtcaaagctaggccatttggctgatttggatgatgcgactggcattgggaccttt
ggatttcggggagaagcattggcttctatatctgatgtctcgctgttggagattataact
aaagcccatgggaggccaaatggatatcgtaaggtcatgaagggatccaagtgtttgtat
cttggaattgatgatgaaaggaaagatgtgggtacaacagttgtttctcgcgatttattt
tacaaccaaccagttcgaaggaaatatatgcaatccagccccaagaaggtcttgcactca
gtgaaaaaatgtgtactccgaattgcccttgtgcacccaaaggtttccttcaaatttatt
gacatggaaagtgaggatgagcttctttgcacatgttcttcatcttctcctttggcactt
ttgataagtagttttgggattgaggatttcagctttcttaatgaagtgaatgctaatgat
ggtgcattagaaatttctggctacatatccagtccttatgatagtatttccgttaaggcc
ttccaatatgtttatattaattcacggtatgtatgcaaagggcccatccacaagttgttg
aatcatttggctgctagttttgattgttcggattcatggaaggccaataatggattcctt
aaaggaaagagaagtaagtctcaagcatgtccagcttacctgttaaatttacgttgccca
cattctctctatgatttggcctttgacccattaaagacacatgttgtattcaaggactgg
gaacctgtacttgccttcattgagcgggctatccgttctgcatggatgaaaaaaatagcg
catgattcttttgatgtggatatgttagaggatgctgagctgccattagaaagtagcagg
ttccaaagtcaccagtcttctactcaccttcactcttcccctttgaagaatcttgccaaa
cagcgtgatcatatgtttcataaggaatgtgaaagaatcacatttcaagagttccagaaa
gatcctgtagaacttgcagaagaaaatactgagatggaatttttttctcagccaaaacac
tcttccagtttgttggatggttcatttgctgaatgcttacccatagtgcccccgaagatt
gaccaccgagtgtggacaatagaaagtagctggttccaagatcatcagccttctcgccac
cttttctctccccctttggagaatcttaaaaaagagggagatcatttgtttcgtaaggaa
tgtgaaagaatcacatttggagatgctgagaaagatccggcagagcttcaagaggaaaat
actgaaatggagtatgttcctcagccaaaatattcttttgggttgtcggatggttcattt
gccaaatgcttgcccatagtgccctggaagattgaccgccatgcttggacaatagaaagt
agcaggttccaatatcatcagtcttctcctcacctttactcttctcctttggagaatctt
tccaaagagggtgatcatttgtttcgtgaggaatgtgaaagaatcatatttggagagttt
gagaaacatactccagaacttgaagaggaaaattctaagagggaacttgtttctcagccc
aaatactcatctaaattgttggattgttcgtttgctgaatgcttatccccagtactccag
aagattgacctccatggatggacatctggtaacagattttcattaaaaggaagttatttc
ttggagacttgctttttggctgatggaagatccagcattccagtggagggtgaccttttg
aattcacaacaggggtatgaataccctcaaattgaacctggtgtgagcaatggagcgtca
ggtaccgcatcacctttagataaggatgaatttagcaatgaattcgaggttagcaaggac
atcaaaaagcctcttcgtcaaagctgcttttcacaaggaagcccgccacttggtggggct
ctgttttctggcggcgaggaaagatgtgaatcatcgaccgggtgcttcaagtacaaacgg
aagcggaagcgggtttgttatgataaaaggatggatatcctagaagctgattttagtaac
cagagttttgattcattttcaaggactccattgcaggatgaggcatcatgctctcagcac
ctccccaggctcacgacagctggggacataacagctggatttgatcttatgtcaagagct
tccctgaacttattcccatctcatgcagagccttttactaaagaaactaacttcttatct
gattctattgaaccagtggggaactctatctcagattataaggccttgaattctgtatgg
tgctctaaaatctcagatccctttcctcaaggtgcttcttggaatgatggacattttatc
tataacaatgcacttgaaggaaactccatattgggtgaaggaactagtcgtgggcaattg
gcagatactgaagagaattacaaatttgattatgacagtaaattgaggagatccaaccaa
gaaaagtgcaccacagcaagaagtggattacgttttgagtattatgatagttctagcgaa
gacttctgcaaatatctccaggaacatgacccttgtaataaattctccccagaacattct
gatgtgccatttgataagacagactggttatgctccgtctcgagcagtatagaatatgat
aatcctgaaacccaaaggtataaatttagaaatcataactgtgaaccaaatcctattcat
aaagaattgtcaagaagaagccattcggctccaccatttcacaggcataaaaggaggtat
atctccttaaattgttgttcagtggaagctggaaaatcaaatgctcataccttgcattgt
gccaaaaattctccagaggctggtgcatttaagcatctccaacaatcttctggtgtctgt
aatacaaatgttaagccaagttctgaggaggaggatttcagaccggatttcaagatcgag
tcaagtaccattttggacttggaggagactcataaagctgaaaattttaagttatccctt
tgtccacacgctcaccttgcagctcaggctgaaggtactattatttcagggaccaaatgg
cggaatggtcatccacagactacaaataacaatatatcctgtgatattcacaatcaagat
aatatactcgacatctcttcgggactcttacatcttactggagaattttttattcctgat
tctatcaataaaagttgccttgaagatgccaaggttctccaacaggtggataagaaattc
atcccggtagtggctggtggaacacttgcagtaattgatcagcatgctgcagatgaaagg
attcgactggaagaacttcgtcataaggtgttatctggagaagggaagtcagtagcctat
ttggatgctgaacaagagctggtccttccagagattgggtatcaattactgcaaaatttt
gctgaacagataaaagattggggttggatctgcaatattcatactcaaggttcaagatcc
ttcaacaagaatttgaatcttcttcagcggcagataactgttatcacacttctcgcggta
ccctgcattttcggcgtcaatttatctgatgtagaccttttagaatttcttcagcagctt
gctgatacggatggatcgtcaacaacccctccttctgttcttcgagtccttaattctaaa
gcctgcagaggagcaattatgtttggagattttttgctgccttcagaatgtgcccttatt
gttgaagagctaaagcagacctctctgtgtttccaatgtgctcatggacgaccaacaacg
gtaccacttgtcaacttggaggcattacataaacagatagctcagcttaacaattcaagt
gagttgtggcatggcttacatcgtggagaaataagtcttaagcgtgcaagccggcgttta
ttaactgggggtagaggatag
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