KEGG   Citrus x clementina (clementine): CICLE_v10024768mg
Entry
CICLE_v10024768mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CICLE_v10024768mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cic03021]
    CICLE_v10024768mg
Enzymes [BR:cic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CICLE_v10024768mg
Transcription machinery [BR:cic03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     CICLE_v10024768mg
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpa2_4 RNA_pol_Rpb2_2 CSPP1_C
Other DBs
NCBI-GeneID: 18037248
NCBI-ProteinID: XP_006428126
UniProt: V4SW20
LinkDB
Position
Unknown
AA seq 1082 aa
MADVEFQYLDAGSPVVRERFNFGQFPVMLKTRRCHLQGADSQKLVSLKEEAAEMGGYFIL
NGLERVFRSVILPKQNYPMSMVRSSFRDRREGYTDKAVVIRCVRKDQSSVTLKLYYLLNG
SVRLGFWLQGKEYLLPVGIVLKALVDTNDLEIFNHLTCCYDEKYKKEKGAVGSPLVSERV
KIILAEVQDLSLTTRLQCLQHIGEHFQPVIDGLQSESYYAVAETVIRDYIFVHLNDNNDK
FNLLIFMLQKLFSLVDHTSVSDNPDSLQNQEILLPGHLITIYLKEKLEDWLRKGKKLIQD
EIENNGKKFDFFNLANIKKVMEKNPSKQIGTSIETMLKTGRLATQTGLDLQQRAGYTVQA
ERLNFLRFISFFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTST
CRVASYYDSRGNIRDFSKMRTSILRVLIGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVI
PSSEIEKVVAHLRRLKVSAASVIPDDLEVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNIS
LPSEESQNIELIGPFEQVFMEIRCPDGGDGGRRNAFPATHEEIHPTGMLSVVANLTPYSD
HNQSPRNMYQCQMAKQTMGFSVQALKFRADQKLYHLQTPQTPIVRTNTYTKYSIDEYPTG
TNAIVAVLAYTGYDMEDAMILNKSSVDRGMCHGQIYQTETIDLSDDGNKVDRGQKLFRRN
KDAKSLHSVIDSDGLPYVGQMIHPGEPYCSIYDKTTNSWRTNSRKGSESVFVDYVAVDMK
NSKNLPQKANIRFRHTRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINP
HAFPSRMTIAMLLESVAAKGGSLHGKFMDATPFANSVKKTNGDTGTDESKSLVDELGEML
RTCGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTMDQITRQPI
KGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHVADVCSLCGSVLTATFIHPQK
RAIREIGGLPPARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKITLQLGDGA
TA
NT seq 3249 nt   +upstreamnt  +downstreamnt
atggcagatgttgaatttcaatatcttgatgcgggttctcctgttgtaagagagaggttt
aattttggccagtttcctgtaatgttgaagacaagacgctgtcatttacaaggtgctgat
tcccaaaaattagtatctctcaaagaggaagcagcggaaatgggtggttacttcattctc
aatgggcttgagagagtttttcgatcagtaatattgccgaagcaaaactatccaatgagc
atggtgcggagttcttttcgtgatcggcgggaaggatatactgataaggcagttgttata
aggtgtgtaagaaaagatcaatcttctgtaactcttaaattgtattaccttcttaacgga
agtgtaagacttggattttggttgcaagggaaggaatacctgcttccagtgggcattgtt
ctgaaggcccttgttgacactaatgatcttgaaatttttaatcatttgacgtgctgctat
gacgaaaaatataagaaggaaaagggagctgttggctcaccgctagtaagtgaaagggta
aaaattattctcgctgaagtccaggacttgtctcttacaactcgtcttcagtgcttgcag
catattggtgagcacttccaaccggttattgatggactccaaagcgaaagttactatgct
gttgctgaaactgttataagagactacatctttgttcacctcaatgacaataacgacaaa
ttcaatctgctcatctttatgttgcagaaacttttctcacttgtcgatcatacttctgtg
tcggacaatccagattccctgcagaatcaggaaattttacttcctggtcacttgatcacc
atttatctcaaggagaaactagaggactggcttcggaaggggaagaagctaattcaagat
gagatagagaataatggcaaaaaatttgacttcttcaacttagccaatatcaagaaggtc
atggagaaaaatccttcgaagcaaattggtacaagtattgagacgatgttgaaaactgga
agattagcaactcagacaggtctagatttgcaacagagggctggctacacagttcaggca
gagaggcttaactttctacgtttcatctcattttttcgggctgtccatcgaggggcttca
tttgccgggctccgtacaacaagtgtgagaaaattgctacccgaatcttggggtttcctt
tgccctgtgcatacgcctgatggggagccatgtgggttgctgaaccatatgacttccact
tgtcgagttgcatcatactatgattcccgaggaaatatcagagatttttcaaagatgaga
acgtctattctcagggttctgattggggttgggatgataccttcattgccaaagcttgtt
aaatctggtcctcctgcagttctctctgttcttctagatggccgtgttgttggtgttata
ccttcaagtgaaattgagaaagttgttgctcatttacggagactgaaagtttcagctgct
tcagtgattcctgatgatctagaagtgggatatgttcctttgagcctgggtggagcttat
cctggtttgtacctgttcacatctcctcctaaatttgttcgccctgtcagaaatatttct
ctcccttcggaggaaagtcaaaacatcgaattaattgggccatttgagcaggtcttcatg
gagataaggtgtcctgatggtggagatggtggaagaagaaatgcatttcctgcaactcat
gaagaaattcatcccactgggatgctaagtgtggttgctaatctaacaccttattccgat
cataatcagagcccacgaaatatgtatcagtgtcagatggcaaaacaaacaatgggtttc
tctgtacaagcacttaaattccgtgctgatcagaaactttaccaccttcagactcctcaa
actcccattgttcgcactaacacttatacaaaatacagcatagatgaatatccaactggg
acaaacgcaatagttgcagttctggcttacactgggtatgatatggaggatgctatgatc
ttgaataagtcatcagtagaccgtgggatgtgccatggacaaatataccagacggaaaca
attgacttatctgatgacggcaataaggtagatcgaggccagaaactatttagacgaaac
aaagatgctaaatcactgcattctgtgattgattcagatggacttccgtatgttggacag
atgatacatccgggtgaaccctattgtagcatctacgataagacaacaaattcttggaga
accaacagccgaaagggttcagaatctgtgtttgttgactatgttgctgtcgatatgaaa
aatagcaagaatcttcctcagaaggcgaatatacgttttcgacatactagaaaccctatc
attggtgataaatttagcagcagacacggacagaaaggtgtctgctctcagttgtggcct
gatattgatatgccattttctggagtcacgggaatgcgtccagatctgattatcaatcct
catgcatttccttcgaggatgacaattgcaatgcttttggagtctgttgccgctaaggga
ggtagcttacatggaaaatttatggatgcaacaccatttgcaaattcagtcaagaaaact
aatggagatactgggactgatgaatcaaaatcactagttgatgaactcggtgaaatgtta
aggacatgtgggtttaattatcatggtgtagaggtattgtatagtggggtatatggaaca
gagctcacatgtgaaatttttattgggcctgtctattatcagcggctccggcacatggtt
tcagacaaatttcaggttcgctccactggaacgatggaccaaattacccggcagccaata
aaaggaagaaagcgcggtggaggtattcgttttggagaaatggaacgagattcattgctt
gctcatggagcagcatatttgttgcacgataggcttcacacatgttctgattaccatgtt
gctgatgtgtgttccctctgtggaagtgttcttacagcaacatttatacacccacaaaag
cgggcaatacgagagattggcgggctaccccctgcaagagctcccaagaaagtcacttgt
catgcttgccagacaagtaaaggcatggagactgttgcaatgccctatgtttttagatac
ttggcagctgaacttgctgctatgaacattaaaataacccttcagctaggtgacggagcc
acggcctga

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