Citrus x clementina (clementine): CICLE_v10024768mg
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Entry
CICLE_v10024768mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CICLE_v10024768mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10024768mg
Enzymes [BR:
cic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CICLE_v10024768mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
CICLE_v10024768mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
CSPP1_C
Motif
Other DBs
NCBI-GeneID:
18037248
NCBI-ProteinID:
XP_006428126
UniProt:
V4SW20
LinkDB
All DBs
Position
Unknown
AA seq
1082 aa
AA seq
DB search
MADVEFQYLDAGSPVVRERFNFGQFPVMLKTRRCHLQGADSQKLVSLKEEAAEMGGYFIL
NGLERVFRSVILPKQNYPMSMVRSSFRDRREGYTDKAVVIRCVRKDQSSVTLKLYYLLNG
SVRLGFWLQGKEYLLPVGIVLKALVDTNDLEIFNHLTCCYDEKYKKEKGAVGSPLVSERV
KIILAEVQDLSLTTRLQCLQHIGEHFQPVIDGLQSESYYAVAETVIRDYIFVHLNDNNDK
FNLLIFMLQKLFSLVDHTSVSDNPDSLQNQEILLPGHLITIYLKEKLEDWLRKGKKLIQD
EIENNGKKFDFFNLANIKKVMEKNPSKQIGTSIETMLKTGRLATQTGLDLQQRAGYTVQA
ERLNFLRFISFFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTST
CRVASYYDSRGNIRDFSKMRTSILRVLIGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVI
PSSEIEKVVAHLRRLKVSAASVIPDDLEVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNIS
LPSEESQNIELIGPFEQVFMEIRCPDGGDGGRRNAFPATHEEIHPTGMLSVVANLTPYSD
HNQSPRNMYQCQMAKQTMGFSVQALKFRADQKLYHLQTPQTPIVRTNTYTKYSIDEYPTG
TNAIVAVLAYTGYDMEDAMILNKSSVDRGMCHGQIYQTETIDLSDDGNKVDRGQKLFRRN
KDAKSLHSVIDSDGLPYVGQMIHPGEPYCSIYDKTTNSWRTNSRKGSESVFVDYVAVDMK
NSKNLPQKANIRFRHTRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINP
HAFPSRMTIAMLLESVAAKGGSLHGKFMDATPFANSVKKTNGDTGTDESKSLVDELGEML
RTCGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTMDQITRQPI
KGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHVADVCSLCGSVLTATFIHPQK
RAIREIGGLPPARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKITLQLGDGA
TA
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgttgaatttcaatatcttgatgcgggttctcctgttgtaagagagaggttt
aattttggccagtttcctgtaatgttgaagacaagacgctgtcatttacaaggtgctgat
tcccaaaaattagtatctctcaaagaggaagcagcggaaatgggtggttacttcattctc
aatgggcttgagagagtttttcgatcagtaatattgccgaagcaaaactatccaatgagc
atggtgcggagttcttttcgtgatcggcgggaaggatatactgataaggcagttgttata
aggtgtgtaagaaaagatcaatcttctgtaactcttaaattgtattaccttcttaacgga
agtgtaagacttggattttggttgcaagggaaggaatacctgcttccagtgggcattgtt
ctgaaggcccttgttgacactaatgatcttgaaatttttaatcatttgacgtgctgctat
gacgaaaaatataagaaggaaaagggagctgttggctcaccgctagtaagtgaaagggta
aaaattattctcgctgaagtccaggacttgtctcttacaactcgtcttcagtgcttgcag
catattggtgagcacttccaaccggttattgatggactccaaagcgaaagttactatgct
gttgctgaaactgttataagagactacatctttgttcacctcaatgacaataacgacaaa
ttcaatctgctcatctttatgttgcagaaacttttctcacttgtcgatcatacttctgtg
tcggacaatccagattccctgcagaatcaggaaattttacttcctggtcacttgatcacc
atttatctcaaggagaaactagaggactggcttcggaaggggaagaagctaattcaagat
gagatagagaataatggcaaaaaatttgacttcttcaacttagccaatatcaagaaggtc
atggagaaaaatccttcgaagcaaattggtacaagtattgagacgatgttgaaaactgga
agattagcaactcagacaggtctagatttgcaacagagggctggctacacagttcaggca
gagaggcttaactttctacgtttcatctcattttttcgggctgtccatcgaggggcttca
tttgccgggctccgtacaacaagtgtgagaaaattgctacccgaatcttggggtttcctt
tgccctgtgcatacgcctgatggggagccatgtgggttgctgaaccatatgacttccact
tgtcgagttgcatcatactatgattcccgaggaaatatcagagatttttcaaagatgaga
acgtctattctcagggttctgattggggttgggatgataccttcattgccaaagcttgtt
aaatctggtcctcctgcagttctctctgttcttctagatggccgtgttgttggtgttata
ccttcaagtgaaattgagaaagttgttgctcatttacggagactgaaagtttcagctgct
tcagtgattcctgatgatctagaagtgggatatgttcctttgagcctgggtggagcttat
cctggtttgtacctgttcacatctcctcctaaatttgttcgccctgtcagaaatatttct
ctcccttcggaggaaagtcaaaacatcgaattaattgggccatttgagcaggtcttcatg
gagataaggtgtcctgatggtggagatggtggaagaagaaatgcatttcctgcaactcat
gaagaaattcatcccactgggatgctaagtgtggttgctaatctaacaccttattccgat
cataatcagagcccacgaaatatgtatcagtgtcagatggcaaaacaaacaatgggtttc
tctgtacaagcacttaaattccgtgctgatcagaaactttaccaccttcagactcctcaa
actcccattgttcgcactaacacttatacaaaatacagcatagatgaatatccaactggg
acaaacgcaatagttgcagttctggcttacactgggtatgatatggaggatgctatgatc
ttgaataagtcatcagtagaccgtgggatgtgccatggacaaatataccagacggaaaca
attgacttatctgatgacggcaataaggtagatcgaggccagaaactatttagacgaaac
aaagatgctaaatcactgcattctgtgattgattcagatggacttccgtatgttggacag
atgatacatccgggtgaaccctattgtagcatctacgataagacaacaaattcttggaga
accaacagccgaaagggttcagaatctgtgtttgttgactatgttgctgtcgatatgaaa
aatagcaagaatcttcctcagaaggcgaatatacgttttcgacatactagaaaccctatc
attggtgataaatttagcagcagacacggacagaaaggtgtctgctctcagttgtggcct
gatattgatatgccattttctggagtcacgggaatgcgtccagatctgattatcaatcct
catgcatttccttcgaggatgacaattgcaatgcttttggagtctgttgccgctaaggga
ggtagcttacatggaaaatttatggatgcaacaccatttgcaaattcagtcaagaaaact
aatggagatactgggactgatgaatcaaaatcactagttgatgaactcggtgaaatgtta
aggacatgtgggtttaattatcatggtgtagaggtattgtatagtggggtatatggaaca
gagctcacatgtgaaatttttattgggcctgtctattatcagcggctccggcacatggtt
tcagacaaatttcaggttcgctccactggaacgatggaccaaattacccggcagccaata
aaaggaagaaagcgcggtggaggtattcgttttggagaaatggaacgagattcattgctt
gctcatggagcagcatatttgttgcacgataggcttcacacatgttctgattaccatgtt
gctgatgtgtgttccctctgtggaagtgttcttacagcaacatttatacacccacaaaag
cgggcaatacgagagattggcgggctaccccctgcaagagctcccaagaaagtcacttgt
catgcttgccagacaagtaaaggcatggagactgttgcaatgccctatgtttttagatac
ttggcagctgaacttgctgctatgaacattaaaataacccttcagctaggtgacggagcc
acggcctga
DBGET
integrated database retrieval system